RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 IGLC1P0CG04 106 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 OR10J1P30954 320 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 TM4SF20Q53R12 229 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 TMEM217Q8N7C4 229 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 CACNG8Q8WXS5 425 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 C20orf24Q9BUV8 137 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 LYRM2Q9NU23 88 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 SELENOKQ9Y6D0 94 aa13.63□□□□□ -0.23
PDLIM7-208ENST00000493815 OR10P1Q8NGE3 313 aa13.62□□□□□ -0.23
PDLIM7-208ENST00000493815 SMCO3A2RU48 225 aa13.61□□□□□ -0.23
PDLIM7-208ENST00000493815 RELQ04864 619 aaPredicted RBP13.61□□□□□ -0.23
PDLIM7-208ENST00000493815 Q5BKY6 102 aa13.61□□□□□ -0.23
PDLIM7-208ENST00000493815 TMEM252Q8N6L7 170 aa13.61□□□□□ -0.23
PDLIM7-208ENST00000493815 CHAC2Q8WUX2 184 aa13.61□□□□□ -0.23
PDLIM7-208ENST00000493815 MCRIP2Q9BUT9 160 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-208ENST00000493815 MBD2Q9UBB5 411 aa13.61□□□□□ -0.23
PDLIM7-208ENST00000493815 PUS1Q9Y606 427 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDLIM7-208ENST00000493815 NOTCH1P46531 2555 aa13.61□□□□□ -0.23
PDLIM7-208ENST00000493815 IGKV1OR2-108A0A075B7D4 117 aa13.6□□□□□ -0.23
PDLIM7-208ENST00000493815 E5RGE8 158 aa13.6□□□□□ -0.23
PDLIM7-208ENST00000493815 LGALS9O00182 355 aa13.6□□□□□ -0.23
PDLIM7-208ENST00000493815 NDUFA4O00483 81 aa13.6□□□□□ -0.23
PDLIM7-208ENST00000493815 CSN3P07498 182 aa13.6□□□□□ -0.23
PDLIM7-208ENST00000493815 AKR1C1Q04828 323 aa13.6□□□□□ -0.23
PDLIM7-208ENST00000493815 SAMD5Q5TGI4 173 aa13.6□□□□□ -0.23
PDLIM7-208ENST00000493815 ADAMTSL5Q6ZMM2 481 aa13.6□□□□□ -0.23
PDLIM7-208ENST00000493815 REC114Q7Z4M0 266 aa13.6□□□□□ -0.23
PDLIM7-208ENST00000493815 TMEM190Q8WZ59 177 aa13.6□□□□□ -0.23
PDLIM7-208ENST00000493815 IGKV1D-37A0A075B6S9 117 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 TRAV14DV4A0A0A6YYC5 116 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 TMEM213A2RRL7 107 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 C2orf70A6NJV1 201 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 ZFP92A6NM28 416 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 ZNF90Q03938 601 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 TOMM20LQ6UXN7 152 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 Q6ZNX1 250 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 OR1S2Q8NGQ3 325 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 ELOVL1Q9BW60 279 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 PEMTQ9UBM1 199 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 TRAV30A0A087WSZ9 112 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 GIPP09681 153 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 NHLH2Q02577 135 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 C9orf66Q5T8R8 295 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 ZNF600Q6ZNG1 722 aa13.59□□□□□ -0.23
PDLIM7-208ENST00000493815 PET100P0DJ07 73 aa13.58□□□□□ -0.24
PDLIM7-208ENST00000493815 FOLR2P14207 255 aa13.58□□□□□ -0.24
PDLIM7-208ENST00000493815 P2RY1P47900 373 aa13.58□□□□□ -0.24
PDLIM7-208ENST00000493815 SULT1A1P50225 295 aa13.58□□□□□ -0.24
PDLIM7-208ENST00000493815 DLK1P80370 383 aa13.58□□□□□ -0.24
PDLIM7-208ENST00000493815 EWSR1Q01844 656 aaKnown RBP eCLIP13.58□□□□□ -0.24
PDLIM7-208ENST00000493815 SLC38A11Q08AI6 406 aa13.58□□□□□ -0.24
PDLIM7-208ENST00000493815 STX12Q86Y82 276 aa13.58□□□□□ -0.24
PDLIM7-208ENST00000493815 hCG_2014768A0A024R1R8 64 aa13.57□□□□□ -0.24
PDLIM7-208ENST00000493815 IGHV3-49A0A0A0MS15 119 aa13.57□□□□□ -0.24
PDLIM7-208ENST00000493815 A8MWP6 167 aa13.57□□□□□ -0.24
PDLIM7-208ENST00000493815 SCGB2A1O75556 95 aa13.57□□□□□ -0.24
PDLIM7-208ENST00000493815 CBLN1P23435 193 aa13.57□□□□□ -0.24
PDLIM7-208ENST00000493815 OR2F1Q13607 317 aa13.57□□□□□ -0.24
PDLIM7-208ENST00000493815 ZFAND3Q9H8U3 227 aa13.57□□□□□ -0.24
PDLIM7-208ENST00000493815 DAZ1Q9NQZ3 744 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-208ENST00000493815 UFC1Q9Y3C8 167 aa13.57□□□□□ -0.24
PDLIM7-208ENST00000493815 RD3LP0DJH9 198 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 PSG1P11464 419 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 RAP2BP61225 183 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 THAP8Q8NA92 274 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 OR2T35Q8NGX2 323 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 THAP6Q8TBB0 222 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 IGHV3OR16-13A0A075B7E8 117 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 IGHV3-74A0A0B4J1X5 117 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 SMLR1H3BR10 107 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 YPEL3P61236 119 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 TMEM144Q7Z5S9 345 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 LILRB2Q8N423 598 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 SLC25A31Q9H0C2 315 aa13.56□□□□□ -0.24
PDLIM7-208ENST00000493815 PRB2P02812 416 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-208ENST00000493815 GATA2P23769 480 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-208ENST00000493815 KRTAP10-11P60412 298 aa13.55□□□□□ -0.24
PDLIM7-208ENST00000493815 TMEM182Q6ZP80 229 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-208ENST00000493815 Q8WTZ3 238 aa13.55□□□□□ -0.24
PDLIM7-208ENST00000493815 TOMM40O96008 361 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 APOHP02749 345 aaPredicted RBP13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 IL4P05112 153 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 LYL1P12980 280 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 S100A11P31949 105 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 HBG1P69891 147 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 HBG2P69892 147 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 BEAN1Q3B7T3 259 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 OR5C1Q8NGR4 320 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 TRGV9Q99603 122 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 GGACTQ9BVM4 153 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 NPVFQ9HCQ7 196 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 MLXQ9UH92 298 aa13.54□□□□□ -0.24
PDLIM7-208ENST00000493815 IGHV3-66A0A0C4DH42 116 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 A0A1B0GVG6 124 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 G3V3Q6 166 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 IGLV1-51P01701 117 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 RPL12P30050 165 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 INSL3P51460 131 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 CLINT1Q14677 625 aa13.53□□□□□ -0.24
PDLIM7-208ENST00000493815 BTNL8Q6UX41 500 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms