RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 TPPP2P59282 170 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 Q0VG73 95 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 PATE2Q6UY27 113 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 ZNF329Q86UD4 541 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 FXYD5Q96DB9 178 aa7.74□□□□□ -1.17
NPHP3-209ENST00000493732 ARFGEF3Q5TH69 2177 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 IGHV3-72A0A0B4J1Y9 119 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 TRAV5A0A0B4J249 113 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 SMIM27A0A1W2PRY6 76 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 LY6LH3BQJ8 138 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 MGST1P10620 155 aaKnown RBP7.73□□□□□ -1.17
NPHP3-209ENST00000493732 SFTPCP11686 197 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 UBE2G1P62253 170 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 OR5I1Q13606 314 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 PLGLAQ15195 96 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 ANKRD39Q53RE8 183 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 HCP5Q6MZN7 132 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 BAGE2Q86Y30 109 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 OR8I2Q8N0Y5 310 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 OR11H6Q8NGC7 330 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 CMTM2Q8TAZ6 248 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 RITA1Q96K30 269 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 TPSG1Q9NRR2 321 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 DPM3Q9P2X0 92 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 DMXL1Q9Y485 3027 aa7.73□□□□□ -1.17
NPHP3-209ENST00000493732 IZUMO1RA6ND01 250 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 ZNF705GA8MUZ8 300 aaPredicted RBP7.72□□□□□ -1.17
NPHP3-209ENST00000493732 SNURFLB1AK76 121 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 IGLV2-8P01709 118 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 HIST1H1EP10412 219 aaKnown RBP7.72□□□□□ -1.17
NPHP3-209ENST00000493732 ORM2P19652 201 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 CBLN1P23435 193 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 IER3P46695 156 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 TMEM183BQ1AE95 376 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 OR10J3Q5JRS4 329 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 TPTE2P1Q5T6R2 138 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 C1orf122Q6ZSJ8 110 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 OR1B1Q8NGR6 318 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 SRSF12Q8WXF0 261 aaKnown RBP7.72□□□□□ -1.17
NPHP3-209ENST00000493732 SERTAD4Q9NUC0 356 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 ONECUT1Q9UBC0 465 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 EPDR1Q9UM22 224 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 KLF12Q9Y4X4 402 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 OOSP1A8MZH6 123 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 TEX22C9J3V5 150 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 C22orf46C9J442 243 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 AMY1AP04745 511 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 REG1AP05451 166 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 NBEAP1P0C6P0 100 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 PYYP10082 97 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 COX7A1P24310 79 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 DDTP30046 118 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 MYCNOSP40205 109 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 SSBP2P81877 361 aaPredicted RBP7.72□□□□□ -1.17
NPHP3-209ENST00000493732 MORN5Q5VZ52 161 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 CCDC144NLQ6NUI1 221 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 C5orf17Q8NAS9 161 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 GRAMD2BQ96HH9 432 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 MS4A10Q96PG2 267 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 RNASE7Q9H1E1 156 aaKnown RBP7.72□□□□□ -1.17
NPHP3-209ENST00000493732 ZNF331Q9NQX6 463 aaPredicted RBP7.72□□□□□ -1.17
NPHP3-209ENST00000493732 TMEM14CQ9P0S9 112 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 NAT8BQ9UHF3 227 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 HIGD1AQ9Y241 93 aa7.72□□□□□ -1.17
NPHP3-209ENST00000493732 ZFHX4Q86UP3 3567 aa7.71□□□□□ -1.17
NPHP3-209ENST00000493732 PTPRZ1P23471 2315 aaPredicted RBP7.71□□□□□ -1.18
NPHP3-209ENST00000493732 LYNX1G3V0Z9 82 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 CNIH1O95406 144 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 SLC25A5P05141 298 aaKnown RBP7.71□□□□□ -1.18
NPHP3-209ENST00000493732 LYNX1P0DP58 116 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 GPR6P46095 362 aaPredicted RBP7.71□□□□□ -1.18
NPHP3-209ENST00000493732 RELQ04864 619 aaPredicted RBP7.71□□□□□ -1.18
NPHP3-209ENST00000493732 USF2Q15853 346 aaPredicted RBP7.71□□□□□ -1.18
NPHP3-209ENST00000493732 LBHQ53QV2 105 aaPredicted RBP7.71□□□□□ -1.18
NPHP3-209ENST00000493732 FAM209BQ5JX69 171 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 BAGE3Q86Y29 109 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 WIPF2Q8TF74 440 aaPredicted RBP7.71□□□□□ -1.18
NPHP3-209ENST00000493732 FMC1Q96HJ9 113 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 GPR82Q96P67 336 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 RASL11BQ9BPW5 248 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 ATG101Q9BSB4 218 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 FBXL15Q9H469 300 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 AKAP13Q12802 2813 aa7.71□□□□□ -1.18
NPHP3-209ENST00000493732 PCNX1Q96RV3 2341 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 LOC105371242A0A075B767 164 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 TRAV30A0A087WSZ9 112 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 NBR2O15453 112 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 SIAH2O43255 324 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 PAX1P15863 534 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 PRTN3P24158 256 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 MFAP2P55001 183 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 C9orf152Q5JTZ5 239 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 ATP5L2Q7Z4Y8 100 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 KIR3DL3Q8N743 410 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 NPBQ8NG41 125 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 TMEM68Q96MH6 324 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 SSBP3Q9BWW4 388 aaPredicted RBP7.7□□□□□ -1.18
NPHP3-209ENST00000493732 MRPL36Q9P0J6 103 aaKnown RBP7.7□□□□□ -1.18
NPHP3-209ENST00000493732 CFAP47Q6ZTR5 3102 aa7.7□□□□□ -1.18
NPHP3-209ENST00000493732 ROS1P08922 2347 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms