RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TNFRSF19Q9NS68 423 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 F11RQ9Y624 299 aaKnown RBP11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 FN1P02751 2386 aaKnown RBP11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 UBE2L5PA0A1B0GUS4 154 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 ATP6V0E1O15342 81 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 S100A8P05109 93 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 EGR2P11161 476 aaPredicted RBP11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 DEFA4P12838 97 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 CEBPGP53567 150 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 SCGB2A2Q13296 93 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 VWC2Q2TAL6 325 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 TMEM41BQ5BJD5 291 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 NIPSNAP3BQ9BS92 247 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 VSIRQ9H7M9 311 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 GNG13Q9P2W3 67 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 TIMM9Q9Y5J7 89 aa11.11□□□□□ -0.63
PDZRN3-210ENST00000492909 NPIPB5A8MRT5 1133 aa11.1□□□□□ -0.63
PDZRN3-210ENST00000492909 CORTO00230 105 aa11.1□□□□□ -0.63
PDZRN3-210ENST00000492909 CRYGCP07315 174 aa11.1□□□□□ -0.63
PDZRN3-210ENST00000492909 BCL2P10415 239 aa11.1□□□□□ -0.63
PDZRN3-210ENST00000492909 C9orf152Q5JTZ5 239 aa11.1□□□□□ -0.63
PDZRN3-210ENST00000492909 ASPHD1Q5U4P2 390 aa11.1□□□□□ -0.63
PDZRN3-210ENST00000492909 PVRIGQ6DKI7 326 aa11.1□□□□□ -0.63
PDZRN3-210ENST00000492909 RBMS3Q6XE24 437 aaKnown RBP11.1□□□□□ -0.63
PDZRN3-210ENST00000492909 OR1L6Q8NGR2 347 aa11.1□□□□□ -0.63
PDZRN3-210ENST00000492909 WNT10AQ9GZT5 417 aa11.1□□□□□ -0.63
PDZRN3-210ENST00000492909 NSD1Q96L73 2696 aaPredicted RBP11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 SMCO3A2RU48 225 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 CXorf65A6NEN9 183 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 LINC01548A6NM66 108 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 ZNF727A8MUV8 499 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 MFAP2P55001 183 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 S100A12P80511 92 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 CD69Q07108 199 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 C19orf35Q6ZS72 473 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 CENPVQ7Z7K6 275 aaPredicted RBP11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 TTC9CQ8N5M4 171 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 CACNG8Q8WXS5 425 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 TAF15Q92804 592 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 TMEM68Q96MH6 324 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 ZFHX3Q15911 3703 aa11.09□□□□□ -0.63
PDZRN3-210ENST00000492909 B4DEV8 164 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 FNDC10F2Z333 226 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 IGHG2P01859 326 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 SMIM6P0DI80 62 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 GPX4P36969 197 aaPredicted RBP11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 OPRK1P41145 380 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 BLCAPP62952 87 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 PMS2P11Q13670 270 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 ECSCRQ19T08 205 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 ARSJQ5FYB0 599 aaPredicted RBP11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 FAM90A2PQ658T7 463 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 UNQ5815/PRO19632Q6UWF5 114 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 LCN15Q6UWW0 184 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 SSX7Q7RTT5 188 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 MISP3Q96FF7 219 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 RCC1LQ96I51 464 aaKnown RBP11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 NPVFQ9HCQ7 196 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 CDC42EP3Q9UKI2 254 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 AP4M1O00189 453 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 FABP9Q0Z7S8 132 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 ETFRF1Q6IPR1 90 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 SLC16A13Q7RTY0 426 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 TMEM86BQ8N661 226 aa11.08□□□□□ -0.64
PDZRN3-210ENST00000492909 ZFP92A6NM28 416 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 CYB5BO43169 146 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 IFNA1P01562 189 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 FGF7P21781 194 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 CRIP2P52943 208 aaPredicted RBP11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 PNRC1Q12796 327 aaPredicted RBP11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 ELOBQ15370 118 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 TREML4Q6UXN2 200 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 OR5T1Q8NG75 326 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 FAM110DQ8TAY7 271 aaPredicted RBP11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 SLC35E1Q96K37 410 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 TCEAL7Q9BRU2 100 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 FNDC4Q9H6D8 234 aaPredicted RBP11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 VAX2Q9UIW0 290 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 WDR83OSQ9Y284 106 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 DMRT1Q9Y5R6 373 aa11.07□□□□□ -0.64
PDZRN3-210ENST00000492909 NIPBLQ6KC79 2804 aaeCLIP11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 MAP1LC3B2A6NCE7 125 aa11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 MPDU1O75352 247 aa11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 IGF1P05019 195 aa11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 S100A9P06702 114 aaKnown RBP11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 SRD5A1P18405 259 aa11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 MDKP21741 143 aaPredicted RBP11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 FGF8P55075 233 aaPredicted RBP11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 GAMTQ14353 236 aa11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 MLANAQ16655 118 aa11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 Q8WTZ3 238 aa11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 MAP1LC3BQ9GZQ8 125 aa11.06□□□□□ -0.64
PDZRN3-210ENST00000492909 TRAV41A0A0B4J266 112 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 G3V318 75 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 CXCL1P09341 107 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 RPS10P46783 165 aaKnown RBP11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 ELLP55199 621 aaPredicted RBP11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 TEPPQ6URK8 271 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 Q6ZS46 218 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms