RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 RFNGQ9Y644 331 aa6.96□□□□□ -1.3
TNFRSF9-203ENST00000492571 ANKRD65E5RJM6 399 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 OPRK1P41145 380 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 RFX2P48378 723 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 TAS2R46P59540 309 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 TSPAN5P62079 268 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 GSG1LQ6UXU4 331 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 SLC35G3Q8N808 338 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 C15orf53Q8NAA6 179 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 OR5H2Q8NGV7 314 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 Q8WTZ3 238 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 AUNIPQ9H7T9 357 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 SEPSECSQ9HD40 501 aaKnown RBP6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 TXNL4BQ9NX01 149 aaKnown RBP6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 PRR13Q9NZ81 148 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
TNFRSF9-203ENST00000492571 HSPG2P98160 4391 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 MEIS3P1A6NDR6 274 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 CLN5O75503 358 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 ATG12O94817 140 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 PMP2P02689 132 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 PPP5CP53041 499 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 AQP4P55087 323 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 OXA1LQ15070 435 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 IDNKQ5T6J7 187 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 FAM222AQ5U5X8 452 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 C6orf223Q8N319 242 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 OR4X1Q8NH49 305 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 NRG4Q8WWG1 115 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 S100A16Q96FQ6 103 aaKnown RBP6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 DKK2Q9UBU2 259 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 PFDN2Q9UHV9 154 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 GOLT1BQ9Y3E0 138 aa6.94□□□□□ -1.3
TNFRSF9-203ENST00000492571 RPS10-NUDT3A0A1W2PQS6 291 aa6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 H3BMM0 161 aa6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 GSTZ1O43708 216 aaPredicted RBP6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 HBE1P02100 147 aa6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 HNRNPCP07910 306 aaKnown RBP eCLIP6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 DAD1P61803 113 aa6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 MXD1Q05195 221 aa6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 PHLDA2Q53GA4 152 aa6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 ZNF705AQ6ZN79 300 aaPredicted RBP6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 SEC22AQ96IW7 307 aa6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 C7orf50Q9BRJ6 194 aaKnown RBP6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 NRN1Q9NPD7 142 aa6.93□□□□□ -1.3
TNFRSF9-203ENST00000492571 ZNF705FA8MVS1 300 aaPredicted RBP6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 FAM90A26D6RGX4 464 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 TMEM127O75204 238 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 IGKV3-20P01619 116 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 ZNF705DP0CH99 300 aaPredicted RBP6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 ZNF705BP0CI00 300 aaPredicted RBP6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 PSMB9P28065 219 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 SDC2P34741 201 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 ID1P41134 155 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 NKX2-1P43699 371 aaPredicted RBP6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 HSPA13P48723 471 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 CCL18P55774 89 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 SPINK9Q5DT21 86 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 TMEM88Q6PEY1 159 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 C16orf54Q6UWD8 224 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 TBC1D26Q86UD7 250 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 MRGPRFQ96AM1 343 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 YTHDF1Q9BYJ9 559 aaKnown RBP6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 VCX3BQ9H321 246 aa6.92□□□□□ -1.3
TNFRSF9-203ENST00000492571 NBDYA0A0U1RRE5 68 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 INS-IGF2F8WCM5 200 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 HLA-DRB4P13762 266 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 RPL5P46777 297 aaKnown RBP6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 AKR1C2P52895 323 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 TAS2R20P59543 309 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 RRN3P1Q2M238 152 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 TIGITQ495A1 244 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 SIGLEC15Q6ZMC9 328 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 OR4B1Q8NGF8 309 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 OR1S2Q8NGQ3 325 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 OR5H6Q8NGV6 325 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 COQ8AQ8NI60 647 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 RNASE11Q8TAA1 199 aaKnown RBP6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 SLC25A38Q96DW6 304 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 LINC00052Q96N35 136 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 TMEM208Q9BTX3 173 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 HLA-DRB4X5D2U9 266 aa6.91□□□□□ -1.3
TNFRSF9-203ENST00000492571 LOC102723971A0A1B0GUV8 181 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 EPM2AB3EWF7 344 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 SLC25A4P12235 298 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 PRSS3P35030 304 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 NUP62P37198 522 aaPredicted RBP6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 ETV6P41212 452 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 FXYD7P58549 80 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 YPEL3P61236 119 aaPredicted RBP6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 TMEM69Q5SWH9 247 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 SPATA31B1PQ5VZV4 182 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 ETFRF1Q6IPR1 90 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 EBLN2Q6P2I7 272 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 SPATA12Q7Z6I5 190 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 GLMPQ8WWB7 406 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 FCGR1BQ92637 280 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 RRNAD1Q96FB5 475 aaKnown RBP6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 CNBD2Q96M20 576 aa6.9□□□□□ -1.3
TNFRSF9-203ENST00000492571 MAGT1Q9H0U3 335 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms