RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 RPL5P46777 297 aaKnown RBP8.27□□□□□ -1.09
CACNA1C-228ENST00000492150 TAS2R20P59543 309 aa8.27□□□□□ -1.09
CACNA1C-228ENST00000492150 LPCAT3Q6P1A2 487 aa8.27□□□□□ -1.09
CACNA1C-228ENST00000492150 IZUMO2Q6UXV1 221 aa8.27□□□□□ -1.09
CACNA1C-228ENST00000492150 Q6ZSN1 163 aa8.27□□□□□ -1.09
CACNA1C-228ENST00000492150 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
CACNA1C-228ENST00000492150 SLC35G3Q8N808 338 aa8.27□□□□□ -1.09
CACNA1C-228ENST00000492150 S100A16Q96FQ6 103 aaKnown RBP8.27□□□□□ -1.09
CACNA1C-228ENST00000492150 SEPSECSQ9HD40 501 aaKnown RBP8.27□□□□□ -1.09
CACNA1C-228ENST00000492150 DKK2Q9UBU2 259 aa8.27□□□□□ -1.09
CACNA1C-228ENST00000492150 LOC100506127A0A0U1RQW1 187 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 SMIM9A6NGZ8 99 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 HNRNPCP07910 306 aaKnown RBP eCLIP8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 HLA-DRB4P13762 266 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 OPRK1P41145 380 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 ETV6P41212 452 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 HSPA13P48723 471 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 EIF2B2P49770 351 aaKnown RBP8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 AP2S1P53680 142 aaPredicted RBP8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 SUB1P53999 127 aaKnown RBP eCLIP8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 UCP3P55916 312 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 KRTAP10-2P60368 255 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 BSXQ3C1V8 233 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 FCGR1BQ92637 280 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 C17orf77Q96MU5 243 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 MDFICQ9P1T7 246 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 HLA-DRB4X5D2U9 266 aa8.26□□□□□ -1.09
CACNA1C-228ENST00000492150 PRSS3P35030 304 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 FXYD7P58549 80 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 DEFB1P60022 68 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 TSPAN5P62079 268 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 SNRPD3P62318 126 aaKnown RBP8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 OXA1LQ15070 435 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 UBE2NLQ5JXB2 153 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 TMEM69Q5SWH9 247 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 GDF5OSQ5U4N7 250 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 FAM222AQ5U5X8 452 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 NIPSNAP3BQ9BS92 247 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 NRN1Q9NPD7 142 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 RFNGQ9Y644 331 aa8.25□□□□□ -1.09
CACNA1C-228ENST00000492150 IGHV3OR16-12A0A075B7B8 117 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 TRAV30A0A087WSZ9 112 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 TMEM127O75204 238 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 IGLC1P0CG04 106 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 HTN3P15516 51 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 NKX2-1P43699 371 aaPredicted RBP8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 HOXA1P49639 335 aaPredicted RBP8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 DHODHQ02127 395 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 USF2Q15853 346 aaPredicted RBP8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 TMEM88Q6PEY1 159 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 OR1S2Q8NGQ3 325 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 GPX8Q8TED1 209 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 Q8WTZ3 238 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 RAB26Q9ULW5 256 aa8.24□□□□□ -1.09
CACNA1C-228ENST00000492150 A0A0G2JRQ6 117 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 TEX48A0A1B0GUV7 120 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 BUB3O43684 328 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 SCGB2A1O75556 95 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 IGKV3-20P01619 116 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 TGFBR1P36897 503 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 RND2P52198 227 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 AKR1C2P52895 323 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 YPEL3P61236 119 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 RND3P61587 244 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 PRSS54Q6PEW0 395 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 SIGLEC15Q6ZMC9 328 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 SAMD12Q8N8I0 201 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 ZNF709Q8N972 641 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 TP53RKQ96S44 253 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 VCX3BQ9H321 246 aa8.23□□□□□ -1.09
CACNA1C-228ENST00000492150 PI3P19957 117 aa8.22□□□□□ -1.09
CACNA1C-228ENST00000492150 OR10J1P30954 320 aa8.22□□□□□ -1.09
CACNA1C-228ENST00000492150 FAM3BP58499 235 aaPredicted RBP8.22□□□□□ -1.09
CACNA1C-228ENST00000492150 C1orf158Q8N1D5 194 aa8.22□□□□□ -1.09
CACNA1C-228ENST00000492150 CLUHP3Q96NS8 147 aa8.22□□□□□ -1.09
CACNA1C-228ENST00000492150 PDCD10Q9BUL8 212 aa8.22□□□□□ -1.09
CACNA1C-228ENST00000492150 YTHDF1Q9BYJ9 559 aaKnown RBP8.22□□□□□ -1.09
CACNA1C-228ENST00000492150 ENY2Q9NPA8 101 aa8.22□□□□□ -1.09
CACNA1C-228ENST00000492150 LRP2P98164 4655 aa8.21□□□□□ -1.09
CACNA1C-228ENST00000492150 NBDYA0A0U1RRE5 68 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 RPS10-NUDT3A0A1W2PQS6 291 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 M0QYG6 137 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 NXPH3O95157 252 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 IL4P05112 153 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 PGAM2P15259 253 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 RPS19P39019 145 aaKnown RBP8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 AARDQ4LEZ3 155 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 CROCCP3Q8IVE0 287 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 TMEM170AQ8WVE7 144 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 WDR12Q9GZL7 423 aaKnown RBP8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 SLC35B3Q9H1N7 401 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 SAV1Q9H4B6 383 aaPredicted RBP8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 TMED3Q9Y3Q3 217 aa8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 YTHDF2Q9Y5A9 579 aaKnown RBP8.21□□□□□ -1.1
CACNA1C-228ENST00000492150 C3orf85A0A1B0GTC6 90 aa8.2□□□□□ -1.1
CACNA1C-228ENST00000492150 LOC102723971A0A1B0GUV8 181 aa8.2□□□□□ -1.1
CACNA1C-228ENST00000492150 ATG12O94817 140 aa8.2□□□□□ -1.1
CACNA1C-228ENST00000492150 SLC25A4P12235 298 aa8.2□□□□□ -1.1
CACNA1C-228ENST00000492150 BTF3P20290 206 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms