RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 PUS1Q9Y606 427 aaKnown RBP eCLIP11.41□□□□□ -0.58
SS18L1-204ENST00000491916 MBPP02686 304 aaPredicted RBP11.4□□□□□ -0.58
SS18L1-204ENST00000491916 APOHP02749 345 aaPredicted RBP11.4□□□□□ -0.58
SS18L1-204ENST00000491916 IFNA4P05014 189 aa11.4□□□□□ -0.58
SS18L1-204ENST00000491916 GPX4P36969 197 aaPredicted RBP11.4□□□□□ -0.58
SS18L1-204ENST00000491916 LILRB2Q8N423 598 aa11.4□□□□□ -0.58
SS18L1-204ENST00000491916 DYNLRB2Q8TF09 96 aa11.4□□□□□ -0.58
SS18L1-204ENST00000491916 SMIM8Q96KF7 97 aa11.4□□□□□ -0.58
SS18L1-204ENST00000491916 CIB3Q96Q77 187 aaPredicted RBP11.4□□□□□ -0.58
SS18L1-204ENST00000491916 C11orf1Q9H5F2 150 aa11.4□□□□□ -0.58
SS18L1-204ENST00000491916 IGKV1OR2-108A0A075B7D4 117 aa11.39□□□□□ -0.59
SS18L1-204ENST00000491916 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
SS18L1-204ENST00000491916 INMT-MINDY4F8WBC2 141 aa11.39□□□□□ -0.59
SS18L1-204ENST00000491916 CHEK1O14757 476 aa11.39□□□□□ -0.59
SS18L1-204ENST00000491916 OR10J1P30954 320 aa11.39□□□□□ -0.59
SS18L1-204ENST00000491916 ETFRF1Q6IPR1 90 aa11.39□□□□□ -0.59
SS18L1-204ENST00000491916 B9D2Q9BPU9 175 aa11.39□□□□□ -0.59
SS18L1-204ENST00000491916 C19orf73Q9NVV2 129 aa11.39□□□□□ -0.59
SS18L1-204ENST00000491916 GSKIPQ9P0R6 139 aa11.39□□□□□ -0.59
SS18L1-204ENST00000491916 TRAV30A0A087WSZ9 112 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 H3BP45 60 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 SSSCA1O60232 199 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 CCNKO75909 580 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 YIF1AO95070 293 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 CD7P09564 240 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 YPEL3P61236 119 aaPredicted RBP11.38□□□□□ -0.59
SS18L1-204ENST00000491916 SPANXN5Q5MJ07 72 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 FAM90A2PQ658T7 463 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 TMEM14EPQ6UXP3 125 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 OR1S2Q8NGQ3 325 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 ACY3Q96HD9 319 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 RNF2Q99496 336 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 VSIRQ9H7M9 311 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 SMAD5-AS1Q9Y6J3 95 aa11.38□□□□□ -0.59
SS18L1-204ENST00000491916 IGHV3-49A0A0A0MS15 119 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 TRAV14DV4A0A0A6YYC5 116 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 TRAV25A0A0B4J276 109 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 C7orf66A4D0T2 115 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 SNRPGP15A8MWD9 76 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 A8MZ25 164 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 IGHV4-30-4P0DP06 118 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 DEFA1P59665 94 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 DEFA3P59666 94 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 RAB11AP62491 216 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 C2orf50Q96LR7 162 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 RHPN1-AS1Q9BWJ2 59 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 PSENENQ9NZ42 101 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 U3KQE9 123 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 TENM3Q9P273 2699 aa11.37□□□□□ -0.59
SS18L1-204ENST00000491916 IGHV3OR16-13A0A075B7E8 117 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 IGHV3-74A0A0B4J1X5 117 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 K7EPK0 472 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 TSPAN4O14817 238 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 PRAF2O60831 178 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 SCGB1D2O95969 90 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 CRYBB3P26998 211 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 TAS2R30P59541 319 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 DCTN2Q13561 401 aaKnown RBP11.36□□□□□ -0.59
SS18L1-204ENST00000491916 THAP8Q8NA92 274 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 ST8SIA2Q92186 375 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 RAB40CQ96S21 281 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 STRAPQ9Y3F4 350 aaKnown RBP11.36□□□□□ -0.59
SS18L1-204ENST00000491916 NBEAL2Q6ZNJ1 2754 aa11.36□□□□□ -0.59
SS18L1-204ENST00000491916 C5orf51A6NDU8 294 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 FAM25EA8MYX2 175 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 TOMM40O96008 361 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 FRMD6-AS1P0C7T7 363 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 PSG1P11464 419 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 RPP30P78346 268 aaKnown RBP11.35□□□□□ -0.59
SS18L1-204ENST00000491916 ZNF90Q03938 601 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 ARL16Q0P5N6 197 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 USF2Q15853 346 aaPredicted RBP11.35□□□□□ -0.59
SS18L1-204ENST00000491916 GUCA2BQ16661 112 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 NEURL2Q9BR09 285 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 WFDC10AQ9H1F0 79 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 PAIP2BQ9ULR5 123 aaKnown RBP11.35□□□□□ -0.59
SS18L1-204ENST00000491916 DNAH7Q8WXX0 4024 aa11.35□□□□□ -0.59
SS18L1-204ENST00000491916 TSC22D2O75157 780 aa11.34□□□□□ -0.59
SS18L1-204ENST00000491916 SIX6O95475 246 aa11.34□□□□□ -0.59
SS18L1-204ENST00000491916 LINC00322Q6ZN03 302 aaPredicted RBP11.34□□□□□ -0.59
SS18L1-204ENST00000491916 SBSPONQ8IVN8 264 aa11.34□□□□□ -0.59
SS18L1-204ENST00000491916 GINS3Q9BRX5 216 aa11.34□□□□□ -0.59
SS18L1-204ENST00000491916 GPN1Q9HCN4 374 aaPredicted RBP11.34□□□□□ -0.59
SS18L1-204ENST00000491916 STAB2Q8WWQ8 2551 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 IGHV3-66A0A0C4DH42 116 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 METTL15P1P0C7V9 234 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 RD3LP0DJH9 198 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 NPPCP23582 126 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 CD81P60033 236 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 RAB32Q13637 225 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 GSG1LQ6UXU4 331 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 TMEM182Q6ZP80 229 aaPredicted RBP11.33□□□□□ -0.6
SS18L1-204ENST00000491916 RBPMS2Q6ZRY4 209 aaKnown RBP11.33□□□□□ -0.6
SS18L1-204ENST00000491916 ACOT7LQ6ZUV0 252 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 GTSCR1Q86UQ5 136 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 DEFB125Q8N687 156 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 STPG3Q8N7X2 389 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 Q8WTZ3 238 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 SLC35E1Q96K37 410 aa11.33□□□□□ -0.6
SS18L1-204ENST00000491916 CITED4Q96RK1 184 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms