RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 LINC00526Q96FQ7 95 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 C2orf50Q96LR7 162 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 OBSCN-AS1Q96MR7 158 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 C14orf105Q9NVL8 296 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 EPDR1Q9UM22 224 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 HS3ST2Q9Y278 367 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 ZFP30Q9Y2G7 519 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 PRELID3BQ9Y3B1 194 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 EXPH5Q8NEV8 1989 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 A0A087X0T9 212 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 TRAV12-1A0A0B4J245 112 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 LYZL6O75951 148 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 PPIBP23284 216 aaKnown RBP0.86□□□□□ -2.27
CD46-216ENST00000490278 CDKN2CP42773 168 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 MYL6P60660 151 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 HIST1H3AP68431 136 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 H3F3AP84243 136 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 Q8N814 137 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 OR10J5Q8NHC4 309 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 OR51V1Q9H2C8 321 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 ACER3Q9NUN7 267 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 TNRC6BQ9UPQ9 1833 aaKnown RBP0.86□□□□□ -2.27
CD46-216ENST00000490278 PIK3C2GO75747 1445 aa0.86□□□□□ -2.27
CD46-216ENST00000490278 TRBV6-8A0A0A6YYG3 113 aa0.85□□□□□ -2.27
CD46-216ENST00000490278 TRAV3A0A0B4J244 114 aa0.85□□□□□ -2.27
CD46-216ENST00000490278 C7orf71A4D174 169 aa0.85□□□□□ -2.27
CD46-216ENST00000490278 PDE6DO43924 150 aa0.85□□□□□ -2.27
CD46-216ENST00000490278 SERPINE1P05121 402 aa0.85□□□□□ -2.27
CD46-216ENST00000490278 SRSF6Q13247 344 aaKnown RBP0.85□□□□□ -2.27
CD46-216ENST00000490278 NCOA1Q15788 1441 aa0.85□□□□□ -2.27
CD46-216ENST00000490278 TMEM97Q5BJF2 176 aa0.85□□□□□ -2.27
CD46-216ENST00000490278 RNASE7Q9H1E1 156 aaKnown RBP0.85□□□□□ -2.27
CD46-216ENST00000490278 UQCC1Q9NVA1 299 aa0.85□□□□□ -2.27
CD46-216ENST00000490278 GLTPQ9NZD2 209 aa0.85□□□□□ -2.27
CD46-216ENST00000490278 ECM29Q5VYK3 1845 aa0.85□□□□□ -2.27
CD46-216ENST00000490278 RTL1A6NKG5 1358 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 ZFYVE9O95405 1425 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 J3QRK9 145 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 HAND1O96004 215 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 C8GP07360 202 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 SMIM17P0DL12 118 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 AP3S2P59780 193 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 CNBPP62633 177 aaKnown RBP0.84□□□□□ -2.27
CD46-216ENST00000490278 TSNQ15631 228 aaKnown RBP0.84□□□□□ -2.27
CD46-216ENST00000490278 BRMS1LQ5PSV4 323 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 LCA10Q71F78 164 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 OR51A2Q8NGJ7 313 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 OR8D4Q8NGM9 314 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 SLC25A40Q8TBP6 338 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 HIST1H2BLQ99880 126 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 RNF122Q9H9V4 155 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 RASL12Q9NYN1 266 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 TVP23BQ9NYZ1 205 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 UBAP1Q9NZ09 502 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 IDI2-AS1Q9NZ38 188 aa0.84□□□□□ -2.27
CD46-216ENST00000490278 V9GYY5 206 aaPredicted RBP0.84□□□□□ -2.27
CD46-216ENST00000490278 MYO3BQ8WXR4 1341 aa0.84□□□□□ -2.28
CD46-216ENST00000490278 MED1Q15648 1581 aaPredicted RBP0.83□□□□□ -2.28
CD46-216ENST00000490278 C1orf196B1AJZ1 125 aa0.83□□□□□ -2.28
CD46-216ENST00000490278 TMEM114B3SHH9 223 aa0.83□□□□□ -2.28
CD46-216ENST00000490278 M0R2N4 97 aa0.83□□□□□ -2.28
CD46-216ENST00000490278 RHOBP62745 196 aa0.83□□□□□ -2.28
CD46-216ENST00000490278 C1orf137Q5JT78 98 aa0.83□□□□□ -2.28
CD46-216ENST00000490278 Q6Q795 121 aa0.83□□□□□ -2.28
CD46-216ENST00000490278 C3orf56Q8N813 242 aa0.83□□□□□ -2.28
CD46-216ENST00000490278 OR52L1Q8NGH7 329 aa0.83□□□□□ -2.28
CD46-216ENST00000490278 WFDC5Q8TCV5 224 aa0.83□□□□□ -2.28
CD46-216ENST00000490278 SLC22A13Q9Y226 551 aa0.83□□□□□ -2.28
CD46-216ENST00000490278 UTP11Q9Y3A2 253 aaKnown RBP0.83□□□□□ -2.28
CD46-216ENST00000490278 NCOA6Q14686 2063 aaPredicted RBP0.83□□□□□ -2.28
CD46-216ENST00000490278 ZNF106Q9H2Y7 1883 aaKnown RBP0.82□□□□□ -2.28
CD46-216ENST00000490278 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.82□□□□□ -2.28
CD46-216ENST00000490278 CYB5BO43169 146 aa0.82□□□□□ -2.28
CD46-216ENST00000490278 ANP32AP39687 249 aaKnown RBP0.82□□□□□ -2.28
CD46-216ENST00000490278 CCL7P80098 99 aa0.82□□□□□ -2.28
CD46-216ENST00000490278 ESRGQ1W209 222 aa0.82□□□□□ -2.28
CD46-216ENST00000490278 DEFB113Q30KQ7 82 aa0.82□□□□□ -2.28
CD46-216ENST00000490278 GDF5OSQ5U4N7 250 aa0.82□□□□□ -2.28
CD46-216ENST00000490278 MNS1Q8NEH6 495 aa0.82□□□□□ -2.28
CD46-216ENST00000490278 TEX47Q8TBZ9 253 aa0.82□□□□□ -2.28
CD46-216ENST00000490278 FAM172AQ8WUF8 416 aa0.82□□□□□ -2.28
CD46-216ENST00000490278 C4orf3Q8WVX3 66 aa0.82□□□□□ -2.28
CD46-216ENST00000490278 ADAT3Q96EY9 351 aaPredicted RBP0.82□□□□□ -2.28
CD46-216ENST00000490278 FBXO5Q9UKT4 447 aa0.82□□□□□ -2.28
CD46-216ENST00000490278 CCDC144AA2RUR9 1427 aa0.81□□□□□ -2.28
CD46-216ENST00000490278 EML6Q6ZMW3 1958 aa0.81□□□□□ -2.28
CD46-216ENST00000490278 INE1O15225 51 aa0.81□□□□□ -2.28
CD46-216ENST00000490278 SPA17Q15506 151 aa0.81□□□□□ -2.28
CD46-216ENST00000490278 LINC00301Q8NCQ3 95 aa0.81□□□□□ -2.28
CD46-216ENST00000490278 OR2T10Q8NGZ9 312 aa0.81□□□□□ -2.28
CD46-216ENST00000490278 ITFG2Q969R8 447 aa0.81□□□□□ -2.28
CD46-216ENST00000490278 PRAP1Q96NZ9 151 aa0.81□□□□□ -2.28
CD46-216ENST00000490278 C6orf62Q9GZU0 229 aaPredicted RBP0.81□□□□□ -2.28
CD46-216ENST00000490278 UCK1Q9HA47 277 aa0.81□□□□□ -2.28
CD46-216ENST00000490278 ADGRB2O60241 1585 aa0.81□□□□□ -2.28
CD46-216ENST00000490278 SBF1O95248 1867 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 CCDC160A6NGH7 325 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 ZNF736B4DX44 427 aaPredicted RBP0.8□□□□□ -2.28
CD46-216ENST00000490278 SRIP30626 198 aa0.8□□□□□ -2.28
CD46-216ENST00000490278 DEFA3P59666 94 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms