RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 NEURL3Q96EH8 262 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 SIGLEC12Q96PQ1 595 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 LRRC61Q9BV99 259 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 DOCK9Q9BZ29 2069 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 PCDH15Q96QU1 1955 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 PLAC8L1A1L4L8 177 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 GRIFINA4D1Z8 144 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 DPRXA6NFQ7 191 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 YPEL1O60688 119 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 EPPINO95925 133 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 SPTBP11277 2137 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 SSTR5P35346 364 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 MDH2P40926 338 aaKnown RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 GNG4P50150 75 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 PPOXP50336 477 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 RPS11P62280 158 aaKnown RBP eCLIP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 TBC1D28Q2M2D7 210 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 MPV17L2Q567V2 206 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 TSPO2Q5TGU0 170 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 MRPL54Q6P161 138 aaKnown RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 TMEM86AQ8N2M4 240 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 MUC15Q8N387 334 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 DEFB125Q8N687 156 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 OR5H2Q8NGV7 314 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 OR10X1Q8NGY0 326 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 OR13G1Q8NGZ3 307 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 CLDND2Q8NHS1 167 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 SLC25A40Q8TBP6 338 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 FGF13Q92913 245 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 GALMQ96C23 342 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 YPEL2Q96QA6 119 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 ANAPC13Q9BS18 74 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 CHAC1Q9BUX1 264 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 BANF2Q9H503 90 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 RETNQ9HD89 108 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 HHLA2Q9UM44 414 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 PSG8Q9UQ74 426 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 UFC1Q9Y3C8 167 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 IER3IP1Q9Y5U9 82 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 SPAARA0A1B0GVQ0 90 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 MPDU1O75352 247 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 HSBP1O75506 76 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 NRASP01111 189 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 KRASP01116 189 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 APOA2P02652 100 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 MPC1LP0DKB6 136 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 IL3RAP26951 378 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 ATP6V0CP27449 155 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 CD52P31358 61 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 OPRM1P35372 400 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 ECSCRQ19T08 205 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 FBXL22Q6P050 247 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 C19orf35Q6ZS72 473 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 HMGN2P46Q86SG4 172 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 OR2K2Q8NGT1 345 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 RERGQ96A58 199 aaPredicted RBP2.09□□□□□ -2.07
UBXN4-208ENST00000490163 VSIG2Q96IQ7 327 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 P2RX4Q99571 388 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 GPR84Q9NQS5 396 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 SLC7A10Q9NS82 523 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 HSPB8Q9UJY1 196 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 JPT1Q9UK76 154 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 POLR1DQ9Y2S0 133 aa2.09□□□□□ -2.07
UBXN4-208ENST00000490163 TRAV8-6A0A0B4J262 113 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 MUC21A0A0G2JKD1 596 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 MUC21A0A140T8X8 626 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 C7orf71A4D174 169 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 TMEM212A6NML5 194 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 ZNF850A8MQ14 1090 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 H3BSH0 61 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 K7EP34 96 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 SAP18O00422 153 aaKnown RBP2.09□□□□□ -2.08
UBXN4-208ENST00000490163 ISLRO14498 428 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 IGLV2-23P01705 113 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 CFC1BP0CG36 223 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 CFC1P0CG37 223 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 NTF3P20783 257 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 GDF1P27539 372 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 ZNF93P35789 620 aaPredicted RBP2.09□□□□□ -2.08
UBXN4-208ENST00000490163 PDGFRLQ15198 375 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 HLA-DRB5Q30154 266 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 SLC25A34Q6PIV7 304 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 LCN15Q6UWW0 184 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 ZNF550Q7Z398 422 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 UBALD2Q8IYN6 164 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 ATOH7Q8N100 152 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 LGI3Q8N145 548 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 LRRC25Q8N386 305 aaPredicted RBP2.09□□□□□ -2.08
UBXN4-208ENST00000490163 ZNF439Q8NDP4 499 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 OR52E2Q8NGJ4 325 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 ZNF418Q8TF45 676 aaPredicted RBP2.09□□□□□ -2.08
UBXN4-208ENST00000490163 RTN4IP1Q8WWV3 396 aaPredicted RBP2.09□□□□□ -2.08
UBXN4-208ENST00000490163 RSPO3Q9BXY4 272 aaPredicted RBP2.09□□□□□ -2.08
UBXN4-208ENST00000490163 ST20Q9HBF5 79 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 CEP192Q8TEP8 1941 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 PHF3Q92576 2039 aaKnown RBP2.09□□□□□ -2.08
UBXN4-208ENST00000490163 TRAV8-7A0A075B6U6 113 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 TEX48A0A1B0GUV7 120 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 MDFIC2A0A1B0GVS7 189 aa2.09□□□□□ -2.08
UBXN4-208ENST00000490163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms