RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 APOA1P02647 267 aa9.26□□□□□ -0.93
LTA-216ENST00000489638 IGLC1P0CG04 106 aa9.26□□□□□ -0.93
LTA-216ENST00000489638 NPY1RP25929 384 aa9.26□□□□□ -0.93
LTA-216ENST00000489638 RND2P52198 227 aa9.26□□□□□ -0.93
LTA-216ENST00000489638 SNRPD3P62318 126 aaKnown RBP9.26□□□□□ -0.93
LTA-216ENST00000489638 RNASE12Q5GAN4 147 aaKnown RBP9.26□□□□□ -0.93
LTA-216ENST00000489638 ZNF705AQ6ZN79 300 aaPredicted RBP9.26□□□□□ -0.93
LTA-216ENST00000489638 LHFPL1Q86WI0 220 aa9.26□□□□□ -0.93
LTA-216ENST00000489638 OR1S2Q8NGQ3 325 aa9.26□□□□□ -0.93
LTA-216ENST00000489638 YIPF6Q96EC8 236 aa9.26□□□□□ -0.93
LTA-216ENST00000489638 RRNAD1Q96FB5 475 aaKnown RBP9.26□□□□□ -0.93
LTA-216ENST00000489638 IGLV2-18A0A075B6J9 118 aa9.25□□□□□ -0.93
LTA-216ENST00000489638 H3BMM0 161 aa9.25□□□□□ -0.93
LTA-216ENST00000489638 AP2S1P53680 142 aaPredicted RBP9.25□□□□□ -0.93
LTA-216ENST00000489638 USF2Q15853 346 aaPredicted RBP9.25□□□□□ -0.93
LTA-216ENST00000489638 SP6Q3SY56 376 aa9.25□□□□□ -0.93
LTA-216ENST00000489638 RNASE10Q5GAN6 216 aaKnown RBP9.25□□□□□ -0.93
LTA-216ENST00000489638 Q6ZRM9 215 aa9.25□□□□□ -0.93
LTA-216ENST00000489638 UBE2DNLQ8IWF7 75 aa9.25□□□□□ -0.93
LTA-216ENST00000489638 Q8WTZ3 238 aa9.25□□□□□ -0.93
LTA-216ENST00000489638 NRN1Q9NPD7 142 aa9.25□□□□□ -0.93
LTA-216ENST00000489638 COPZ2Q9P299 210 aa9.25□□□□□ -0.93
LTA-216ENST00000489638 ZNF705FA8MVS1 300 aaPredicted RBP9.24□□□□□ -0.93
LTA-216ENST00000489638 IFNA10P01566 189 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 ZNF705DP0CH99 300 aaPredicted RBP9.24□□□□□ -0.93
LTA-216ENST00000489638 ZNF705BP0CI00 300 aaPredicted RBP9.24□□□□□ -0.93
LTA-216ENST00000489638 UCP1P25874 307 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 OR10J1P30954 320 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 EMP1P54849 157 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 SPCS3P61009 180 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 DHODHQ02127 395 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 PRSS54Q6PEW0 395 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 NEU1Q99519 415 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 SEPSECSQ9HD40 501 aaKnown RBP9.24□□□□□ -0.93
LTA-216ENST00000489638 HPGDSO60760 199 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 IL4P05112 153 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 SPART-AS1P0CW21 52 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 SLC25A4P12235 298 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 HLA-DRB4P13762 266 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 ELK1P19419 428 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 HTR2BP41595 481 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 YPEL3P61236 119 aaPredicted RBP9.24□□□□□ -0.93
LTA-216ENST00000489638 SIGLEC15Q6ZMC9 328 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 ARRDC1Q8N5I2 433 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 CCDC71LQ8N9Z2 235 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 FAM210BQ96KR6 192 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 HEYLQ9NQ87 328 aaPredicted RBP9.24□□□□□ -0.93
LTA-216ENST00000489638 KLK11Q9UBX7 282 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 HLA-DRB4X5D2U9 266 aa9.24□□□□□ -0.93
LTA-216ENST00000489638 TMEM189A5PLL7 270 aa9.23□□□□□ -0.93
LTA-216ENST00000489638 GSTZ1O43708 216 aaPredicted RBP9.23□□□□□ -0.93
LTA-216ENST00000489638 IFNA21P01568 189 aa9.23□□□□□ -0.93
LTA-216ENST00000489638 CD3DP04234 171 aa9.23□□□□□ -0.93
LTA-216ENST00000489638 NCS1P62166 190 aa9.23□□□□□ -0.93
LTA-216ENST00000489638 AARDQ4LEZ3 155 aa9.23□□□□□ -0.93
LTA-216ENST00000489638 C2orf83Q53S99 150 aa9.23□□□□□ -0.93
LTA-216ENST00000489638 SLC24A4Q8NFF2 622 aa9.23□□□□□ -0.93
LTA-216ENST00000489638 OR13C8Q8NGS7 320 aa9.23□□□□□ -0.93
LTA-216ENST00000489638 OR52E5Q8NH55 327 aa9.23□□□□□ -0.93
LTA-216ENST00000489638 RNASEH2CQ8TDP1 164 aaKnown RBP9.23□□□□□ -0.93
LTA-216ENST00000489638 VCX3AQ9NNX9 186 aa9.23□□□□□ -0.93
LTA-216ENST00000489638 HSPG2P98160 4391 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 IGHV3OR16-12A0A075B7B8 117 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 FAM25AB3EWG3 89 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 FAM25CB3EWG5 89 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 FAM25GB3EWG6 89 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 BUB3O43684 328 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 TOMM40O96008 361 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 IGKV3-20P01619 116 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 NKX2-1P43699 371 aaPredicted RBP9.22□□□□□ -0.93
LTA-216ENST00000489638 FXYD7P58549 80 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 DEFB1P60022 68 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 GDF5OSQ5U4N7 250 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 FAM219AQ8IW50 185 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 OR52I2Q8NH67 350 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 ZFAND1Q8TCF1 268 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 ACY3Q96HD9 319 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.22□□□□□ -0.93
LTA-216ENST00000489638 DKK2Q9UBU2 259 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 CACNG5Q9UF02 275 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 RFNGQ9Y644 331 aa9.22□□□□□ -0.93
LTA-216ENST00000489638 SMIM9A6NGZ8 99 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 CEBPZOSA8MTT3 80 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 B3GALNT1O75752 331 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 NXPH3O95157 252 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 OR5AC1P0C628 307 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 TBPP20226 339 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 RNF212Q495C1 297 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 SCGB2B2Q4G0G5 96 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 SOHLH1Q5JUK2 328 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 FAM222AQ5U5X8 452 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 OR4D10Q8NGI6 311 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 LHFPL5Q8TAF8 219 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 MARCH1Q8TCQ1 289 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 TMEM170AQ8WVE7 144 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 NPIPB3Q92617 1050 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 TMEM222Q9H0R3 208 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 MTFP1Q9UDX5 166 aa9.21□□□□□ -0.94
LTA-216ENST00000489638 NACAE9PAV3 2078 aa9.2□□□□□ -0.94
LTA-216ENST00000489638 TEX48A0A1B0GUV7 120 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms