RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 ATP6V0E1O15342 81 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 CD5LO43866 347 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 IGHV4-59P01825 116 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 EGR2P11161 476 aaPredicted RBP6.08□□□□□ -1.44
SMC6-209ENST00000489535 DEFA4P12838 97 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 FHITP49789 147 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 SERF2P84101 59 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 GAMTQ14353 236 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 ECSCRQ19T08 205 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 TMEM41BQ5BJD5 291 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 FFAR4Q5NUL3 377 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 ASPHD1Q5U4P2 390 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 PVRIGQ6DKI7 326 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 ETFRF1Q6IPR1 90 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 ACSM6Q6P461 480 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 UNQ5815/PRO19632Q6UWF5 114 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 SPNS3Q6ZMD2 512 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 C16orf82Q7Z2V1 217 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 TMEM144Q7Z5S9 345 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 CENPVQ7Z7K6 275 aaPredicted RBP6.08□□□□□ -1.44
SMC6-209ENST00000489535 TTC9CQ8N5M4 171 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 LFNGQ8NES3 379 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 OR2T6Q8NHC8 308 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 CACNG8Q8WXS5 425 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 ACY3Q96HD9 319 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 GGTLC1Q9BX51 225 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 VSIRQ9H7M9 311 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 MED9Q9NWA0 146 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 ZANQ9Y493 2812 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 ANK3Q12955 4377 aaKnown RBP6.08□□□□□ -1.44
SMC6-209ENST00000489535 NAV2Q8IVL1 2488 aa6.08□□□□□ -1.44
SMC6-209ENST00000489535 BTBD17A6NE02 478 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 LINC01548A6NM66 108 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 NPIPB5A8MRT5 1133 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 ZNF561-AS1K7EIQ3 104 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 TSPAN9O75954 239 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 MT-CO2P00403 227 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 IGHV3-48P01763 117 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 CRYGCP07315 174 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 OR10J1P30954 320 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 IER3P46695 156 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 RAB2AP61019 212 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 RAB31Q13636 194 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 MIC13Q5XKP0 118 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 DPPA3Q6W0C5 159 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 TEX29Q8N6K0 151 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 OR5T1Q8NG75 326 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 OR1L6Q8NGR2 347 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 OR5R1Q8NH85 324 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 SGMS2Q8NHU3 365 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 FAM110DQ8TAY7 271 aaPredicted RBP6.07□□□□□ -1.44
SMC6-209ENST00000489535 ZNF48Q96MX3 618 aaPredicted RBP6.07□□□□□ -1.44
SMC6-209ENST00000489535 HRH4Q9H3N8 390 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 YAE1D1Q9NRH1 226 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 KCNIP2Q9NS61 270 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 TNFRSF19Q9NS68 423 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 MRPL36Q9P0J6 103 aaKnown RBP6.07□□□□□ -1.44
SMC6-209ENST00000489535 LSM4Q9Y4Z0 139 aaKnown RBP6.07□□□□□ -1.44
SMC6-209ENST00000489535 PXMP4Q9Y6I8 212 aa6.07□□□□□ -1.44
SMC6-209ENST00000489535 FLNAP21333 2647 aaKnown RBP6.07□□□□□ -1.44
SMC6-209ENST00000489535 IGKV1OR2-108A0A075B7D4 117 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 A0A1B0GV50 99 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 I3L2K1 104 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 M0QZK8 103 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 CYB5BO43169 146 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 SOX15O60248 233 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 MBP02144 154 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 AMY1AP04745 511 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 RND2P52198 227 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 B2MP61769 119 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 ACOT6Q3I5F7 207 aaPredicted RBP6.06□□□□□ -1.44
SMC6-209ENST00000489535 GAGE13Q4V321 117 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 FAM122CQ6P4D5 195 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 THAP8Q8NA92 274 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 OR10G4Q8NGN3 311 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 OR10G9Q8NGN4 311 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 OR10G7Q8NGN6 311 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 NPIPB3Q92617 1050 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 RPRMQ9NS64 109 aa6.06□□□□□ -1.44
SMC6-209ENST00000489535 IGLV11-55A0A075B6I3 123 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 IGKV1D-37A0A075B6S9 117 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 TRAV41A0A0B4J266 112 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 TCRBV4S1A1TA0A5B7 111 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 ZFP92A6NM28 416 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 G3V318 75 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 K7EIM0 57 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 HOXA3O43365 443 aaPredicted RBP6.05□□□□□ -1.44
SMC6-209ENST00000489535 OR2J3O76001 311 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 YIF1AO95070 293 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 IGHG2P01859 326 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 HBE1P02100 147 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 HIST1H1BP16401 226 aaKnown RBP6.05□□□□□ -1.44
SMC6-209ENST00000489535 ATF4P18848 351 aaPredicted RBP6.05□□□□□ -1.44
SMC6-209ENST00000489535 M6PRP20645 277 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 SRP14P37108 136 aaKnown RBP6.05□□□□□ -1.44
SMC6-209ENST00000489535 RPL29P47914 159 aaKnown RBP6.05□□□□□ -1.44
SMC6-209ENST00000489535 CDC34P49427 236 aaPredicted RBP6.05□□□□□ -1.44
SMC6-209ENST00000489535 CRIP2P52943 208 aaPredicted RBP6.05□□□□□ -1.44
SMC6-209ENST00000489535 DEFA5Q01523 94 aa6.05□□□□□ -1.44
SMC6-209ENST00000489535 ZNF726P1Q15940 193 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms