RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 FAM213BQ8TBF2 198 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 SAT2Q96F10 170 aaPredicted RBP16.28■□□□□ 0.2
SND1-214ENST00000489417 VSIRQ9H7M9 311 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 SLC39A9Q9NUM3 307 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 HIVEP1P15822 2718 aa16.27■□□□□ 0.2
SND1-214ENST00000489417 IGHV3-23P01764 117 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 LINC00869P0C866 280 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 IGLC1P0CG04 106 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 PF4V1P10720 104 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 FCGR2BP31994 310 aaPredicted RBP16.27■□□□□ 0.19
SND1-214ENST00000489417 TPPP2P59282 170 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 RAB2AP61019 212 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 SELENOTP62341 195 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 BLOC1S1P78537 153 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 ATP5G2Q06055 141 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 ACOT6Q3I5F7 207 aaPredicted RBP16.27■□□□□ 0.19
SND1-214ENST00000489417 Q56UQ5 140 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 DPPA3Q6W0C5 159 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 Q6ZRG5 221 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 Q6ZSV7 163 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 TXN2Q99757 166 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 RPRMQ9NS64 109 aa16.27■□□□□ 0.19
SND1-214ENST00000489417 TRAV30A0A087WSZ9 112 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 TMEM89A2RUT3 159 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 F8W735 103 aaPredicted RBP16.26■□□□□ 0.19
SND1-214ENST00000489417 GNG7O60262 68 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 YIF1AO95070 293 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 IGHG4P01861 327 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 CRYBA1P05813 215 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 FHITP49789 147 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 SLC35B1P78383 322 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 ZNF90Q03938 601 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 ZNF329Q86UD4 541 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 ZNF502Q8TBZ5 544 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 EEF1AKMT3Q96AZ1 226 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 SERTAD4Q9NUC0 356 aa16.26■□□□□ 0.19
SND1-214ENST00000489417 ZFHX3Q15911 3703 aa16.25■□□□□ 0.19
SND1-214ENST00000489417 PSMB11A5LHX3 300 aa16.25■□□□□ 0.19
SND1-214ENST00000489417 M6PRP20645 277 aa16.25■□□□□ 0.19
SND1-214ENST00000489417 GATA2P23769 480 aaPredicted RBP16.25■□□□□ 0.19
SND1-214ENST00000489417 TIGITQ495A1 244 aa16.25■□□□□ 0.19
SND1-214ENST00000489417 IGKV1-17P01599 117 aa16.24■□□□□ 0.19
SND1-214ENST00000489417 OR10G4Q8NGN3 311 aa16.24■□□□□ 0.19
SND1-214ENST00000489417 OR10G9Q8NGN4 311 aa16.24■□□□□ 0.19
SND1-214ENST00000489417 OR10G7Q8NGN6 311 aa16.24■□□□□ 0.19
SND1-214ENST00000489417 USMG5Q96IX5 58 aa16.24■□□□□ 0.19
SND1-214ENST00000489417 KLK15Q9H2R5 256 aa16.24■□□□□ 0.19
SND1-214ENST00000489417 TRBV7-1A0A0A6YYK4 115 aa16.23■□□□□ 0.19
SND1-214ENST00000489417 SCGB2A1O75556 95 aa16.23■□□□□ 0.19
SND1-214ENST00000489417 FABP1P07148 127 aa16.23■□□□□ 0.19
SND1-214ENST00000489417 RAB9AP51151 201 aa16.23■□□□□ 0.19
SND1-214ENST00000489417 ZNF616Q08AN1 781 aa16.23■□□□□ 0.19
SND1-214ENST00000489417 PXDC1Q5TGL8 231 aa16.23■□□□□ 0.19
SND1-214ENST00000489417 GAR1Q9NY12 217 aaKnown RBP16.23■□□□□ 0.19
SND1-214ENST00000489417 OR2T8A6NH00 312 aa16.22■□□□□ 0.19
SND1-214ENST00000489417 TCF21O43680 179 aa16.22■□□□□ 0.19
SND1-214ENST00000489417 PSMB8P28062 276 aa16.22■□□□□ 0.19
SND1-214ENST00000489417 GCSAMLQ5JQS6 135 aa16.22■□□□□ 0.19
SND1-214ENST00000489417 FAM122CQ6P4D5 195 aa16.22■□□□□ 0.19
SND1-214ENST00000489417 C10orf99Q6UWK7 81 aa16.22■□□□□ 0.19
SND1-214ENST00000489417 RPP25LQ8N5L8 163 aaKnown RBP16.22■□□□□ 0.19
SND1-214ENST00000489417 CCDC140Q96MF4 163 aa16.22■□□□□ 0.19
SND1-214ENST00000489417 ATP6V0BQ99437 205 aa16.22■□□□□ 0.19
SND1-214ENST00000489417 A0A0G2JLM5 398 aa16.21■□□□□ 0.19
SND1-214ENST00000489417 GPR183P32249 361 aa16.21■□□□□ 0.19
SND1-214ENST00000489417 FOXE3Q13461 319 aa16.21■□□□□ 0.19
SND1-214ENST00000489417 TEX38Q6PEX7 206 aa16.21■□□□□ 0.19
SND1-214ENST00000489417 LCNL1Q6ZST4 164 aa16.21■□□□□ 0.19
SND1-214ENST00000489417 RCC1LQ96I51 464 aaKnown RBP16.21■□□□□ 0.19
SND1-214ENST00000489417 ACTR3CQ9C0K3 210 aaPredicted RBP16.21■□□□□ 0.19
SND1-214ENST00000489417 TOMM40O96008 361 aa16.2■□□□□ 0.18
SND1-214ENST00000489417 ELANEP08246 267 aa16.2■□□□□ 0.18
SND1-214ENST00000489417 YPEL3P61236 119 aaPredicted RBP16.2■□□□□ 0.18
SND1-214ENST00000489417 ZNF726P1Q15940 193 aa16.2■□□□□ 0.18
SND1-214ENST00000489417 CLEC19AQ6UXS0 136 aa16.2■□□□□ 0.18
SND1-214ENST00000489417 LINC00862A6NCI5 91 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 SEC14L6B5MCN3 397 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 CLEC3BP05452 202 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 CTSGP08311 255 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 H2AFB1P0C5Y9 115 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 RD3LP0DJH9 198 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 PSG1P11464 419 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 NDUFA5Q16718 116 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 C16orf95Q9H693 158 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 SLC25A22Q9H936 323 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 CTXND1A0A1B0GTU2 59 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 NUPL2O15504 423 aaKnown RBP16.19■□□□□ 0.18
SND1-214ENST00000489417 CDC34P49427 236 aaPredicted RBP16.19■□□□□ 0.18
SND1-214ENST00000489417 SSX7Q7RTT5 188 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 COMMD1Q8N668 190 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 OR1L4Q8NGR5 311 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 MBD3L1Q8WWY6 194 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 CHRDL1Q9BU40 450 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 HRH4Q9H3N8 390 aa16.19■□□□□ 0.18
SND1-214ENST00000489417 A0A1W2PPV4 95 aa16.18■□□□□ 0.18
SND1-214ENST00000489417 TGOLN2O43493 480 aa16.18■□□□□ 0.18
SND1-214ENST00000489417 COX7A2P2O60397 106 aa16.18■□□□□ 0.18
SND1-214ENST00000489417 ADMP35318 185 aa16.18■□□□□ 0.18
SND1-214ENST00000489417 RHOBP62745 196 aa16.18■□□□□ 0.18
SND1-214ENST00000489417 RNF152Q8N8N0 203 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms