RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 FADDQ13158 208 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 TAF1AQ15573 450 aaPredicted RBP0.66□□□□□ -2.3
PTPN4-212ENST00000488896 IAH1Q2TAA2 248 aaPredicted RBP0.66□□□□□ -2.3
PTPN4-212ENST00000488896 TMEM97Q5BJF2 176 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 LYRM7Q5U5X0 104 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 HACD4Q5VWC8 232 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 Q6Q795 121 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 CLECL1Q8IZS7 167 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 LINC00311Q8N616 119 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 SIGLECL1Q8N7X8 197 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 OR2T35Q8NGX2 323 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 TERB2Q8NHR7 220 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 WFDC5Q8TCV5 224 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 GNPDA2Q8TDQ7 276 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 FAM172AQ8WUF8 416 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 AQP3Q92482 292 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 TSPAN32Q96QS1 320 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 TRABDQ9H4I3 376 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 TVP23BQ9NYZ1 205 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 SLC22A13Q9Y226 551 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 SLC35A3Q9Y2D2 325 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 TONSLQ96HA7 1378 aa0.66□□□□□ -2.3
PTPN4-212ENST00000488896 DOCK3Q8IZD9 2030 aa0.65□□□□□ -2.3
PTPN4-212ENST00000488896 SCN3AQ9NY46 2000 aa0.65□□□□□ -2.3
PTPN4-212ENST00000488896 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.3
PTPN4-212ENST00000488896 SCN8AQ9UQD0 1980 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 TMEM210A6NLX4 147 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 UBL3O95164 117 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 IFNA6P05013 189 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 OR4E1P0C645 316 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 CDC42P60953 191 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 YPEL3P61236 119 aaPredicted RBP0.65□□□□□ -2.31
PTPN4-212ENST00000488896 HIST1H3AP68431 136 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 MRPS15P82914 257 aaKnown RBP0.65□□□□□ -2.31
PTPN4-212ENST00000488896 TMED2Q15363 201 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 LIN52Q52LA3 116 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 AKIRIN2Q53H80 203 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 BRMS1LQ5PSV4 323 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 TEX261Q6UWH6 196 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 LCA10Q71F78 164 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 OR4D11Q8NGI4 311 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 OR13D1Q8NGV5 346 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 PFN4Q8NHR9 129 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 STAG3L4Q8TBR4 150 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 GPR146Q96CH1 333 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 CHMP6Q96FZ7 201 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 ODF3Q96PU9 254 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 UCK1Q9HA47 277 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 U3KQ87 197 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 EML6Q6ZMW3 1958 aa0.65□□□□□ -2.31
PTPN4-212ENST00000488896 SNRNP200O75643 2136 aaKnown RBP0.64□□□□□ -2.31
PTPN4-212ENST00000488896 CACNA1BQ00975 2339 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 IGKV2D-26A0A0A0MRZ7 120 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 TRBV6-7A0A0A0MS04 114 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 TRBV6-8A0A0A6YYG3 113 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 CCDC160A6NGH7 325 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 HCRTO43612 131 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 BANF1O75531 89 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 PROSCO94903 275 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 ZNF682O95780 498 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 CTSDP07339 412 aaPredicted RBP0.64□□□□□ -2.31
PTPN4-212ENST00000488896 HSD11B1P28845 292 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 SRIP30626 198 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 SSR2P43308 183 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 CCL7P80098 99 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 KRR1Q13601 381 aaKnown RBP0.64□□□□□ -2.31
PTPN4-212ENST00000488896 SNCBQ16143 134 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 C12orf74Q32Q52 190 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 LINC01554Q52M75 96 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 SPANXN5Q5MJ07 72 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 C12orf29Q8N999 325 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 OR11H6Q8NGC7 330 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 OR10J5Q8NHC4 309 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 CDC26Q8NHZ8 85 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 SFT2D1Q8WV19 159 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 C2orf50Q96LR7 162 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 PRAP1Q96NZ9 151 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 HIST1H2BLQ99880 126 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 TAS2R4Q9NYW5 299 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 IDI2-AS1Q9NZ38 188 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 KLK9Q9UKQ9 250 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 EPDR1Q9UM22 224 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 PLB1Q6P1J6 1458 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 ANAPC1Q9H1A4 1944 aa0.64□□□□□ -2.31
PTPN4-212ENST00000488896 SNAPC4Q5SXM2 1469 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 NUP155O75694 1391 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 MAP3K5Q99683 1374 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 J3QRK9 145 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 OR2J2O76002 312 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 GADD45GO95257 159 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 CLPSP04118 112 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 CTXN2P0C2S0 81 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 BAALC-AS2P0C853 105 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 PIGPP57054 158 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 C10orf55Q5SWW7 151 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 TEX36Q5VZQ5 186 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 DEFB128Q7Z7B8 93 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 OR52L1Q8NGH7 329 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 OR10X1Q8NGY0 326 aa0.63□□□□□ -2.31
PTPN4-212ENST00000488896 OR4K15Q8NH41 348 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms