RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SEC14L6B5MCN3 397 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 CD5P06127 495 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 PRR20EP86478 221 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 PRR20CP86479 221 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 PRR20DP86480 221 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 PRR20BP86481 221 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 PRR20AP86496 221 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 NDPQ00604 133 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 MLANAQ16655 118 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 MIC13Q5XKP0 118 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 THAP8Q8NA92 274 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 C22orf15Q8WYQ4 148 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 ACY3Q96HD9 319 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 SSX3Q99909 188 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 SLC25A33Q9BSK2 321 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 NKX6-2Q9C056 277 aaPredicted RBP10.04□□□□□ -0.8
NELFE-209ENST00000488426 WNT10AQ9GZT5 417 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 TREM1Q9NP99 234 aa10.04□□□□□ -0.8
NELFE-209ENST00000488426 IGKV1OR2-108A0A075B7D4 117 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 MAP1LC3B2A6NCE7 125 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 YIF1AO95070 293 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 DEFA4P12838 97 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 PEA15Q15121 130 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 GUK1Q16774 197 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 TTC9CQ8N5M4 171 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 STPG3Q8N7X2 389 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 C5orf56Q8N8D9 126 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 OR2T6Q8NHC8 308 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 NARS2Q96I59 477 aaKnown RBP10.03□□□□□ -0.8
NELFE-209ENST00000488426 C19orf24Q9BVV8 132 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 SCRT1Q9BWW7 348 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 MAP1LC3BQ9GZQ8 125 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 SMDT1Q9H4I9 107 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 FBN3Q75N90 2809 aa10.03□□□□□ -0.8
NELFE-209ENST00000488426 A0A1B0GV50 99 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 TMEM218A2RU14 115 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 CLN5O75503 358 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 FSHBP01225 129 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 OR10J1P30954 320 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 CDC34P49427 236 aaPredicted RBP10.02□□□□□ -0.8
NELFE-209ENST00000488426 CCL20P78556 96 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 SRSF3P84103 164 aaKnown RBP10.02□□□□□ -0.8
NELFE-209ENST00000488426 LCN15Q6UWW0 184 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 SSX7Q7RTT5 188 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 TMEM116Q8NCL8 245 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 NPIPB3Q92617 1050 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 FAM103A1Q9BTL3 118 aaKnown RBP10.02□□□□□ -0.8
NELFE-209ENST00000488426 SLC25A22Q9H936 323 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 PITPNC1Q9UKF7 332 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 DMRT1Q9Y5R6 373 aa10.02□□□□□ -0.8
NELFE-209ENST00000488426 MT-CO2P00403 227 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 APOC3P02656 99 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 LINC00869P0C866 280 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 RND2P52198 227 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 PMS2P11Q13670 270 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 ASPHD1Q5U4P2 390 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 C19orf35Q6ZS72 473 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 CYP2G1PQ6ZSU1 146 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 SGMS2Q8NHU3 365 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 RAB24Q969Q5 203 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 EIF5A2Q9GZV4 153 aaKnown RBP10.02□□□□□ -0.81
NELFE-209ENST00000488426 TMEM231Q9H6L2 316 aa10.02□□□□□ -0.81
NELFE-209ENST00000488426 A0A1W2PPV4 95 aa10.01□□□□□ -0.81
NELFE-209ENST00000488426 TCRBV4S1A1TA0A5B7 111 aa10.01□□□□□ -0.81
NELFE-209ENST00000488426 A6NDX4 124 aa10.01□□□□□ -0.81
NELFE-209ENST00000488426 RBFOX3A6NFN3 312 aa10.01□□□□□ -0.81
NELFE-209ENST00000488426 I3L2K1 104 aa10.01□□□□□ -0.81
NELFE-209ENST00000488426 EGR2P11161 476 aaPredicted RBP10.01□□□□□ -0.81
NELFE-209ENST00000488426 SELENOTP62341 195 aa10.01□□□□□ -0.81
NELFE-209ENST00000488426 C16orf82Q7Z2V1 217 aa10.01□□□□□ -0.81
NELFE-209ENST00000488426 TMEM68Q96MH6 324 aa10.01□□□□□ -0.81
NELFE-209ENST00000488426 HSPB9Q9BQS6 159 aa10.01□□□□□ -0.81
NELFE-209ENST00000488426 SOX21Q9Y651 276 aaPredicted RBP10.01□□□□□ -0.81
NELFE-209ENST00000488426 H3BUX3 64 aa10□□□□□ -0.81
NELFE-209ENST00000488426 M0QZK8 103 aa10□□□□□ -0.81
NELFE-209ENST00000488426 GCSAMLQ5JQS6 135 aa10□□□□□ -0.81
NELFE-209ENST00000488426 C9orf139Q6ZV77 190 aa10□□□□□ -0.81
NELFE-209ENST00000488426 TMEM219Q86XT9 240 aa10□□□□□ -0.81
NELFE-209ENST00000488426 TRGV9Q99603 122 aa10□□□□□ -0.81
NELFE-209ENST00000488426 MRPL36Q9P0J6 103 aaKnown RBP10□□□□□ -0.81
NELFE-209ENST00000488426 IGLV11-55A0A075B6I3 123 aa10□□□□□ -0.81
NELFE-209ENST00000488426 IGKV1D-37A0A075B6S9 117 aa10□□□□□ -0.81
NELFE-209ENST00000488426 ZFP92A6NM28 416 aa10□□□□□ -0.81
NELFE-209ENST00000488426 TCF21O43680 179 aa10□□□□□ -0.81
NELFE-209ENST00000488426 IFNA1P01562 189 aa10□□□□□ -0.81
NELFE-209ENST00000488426 RHOBP62745 196 aa10□□□□□ -0.81
NELFE-209ENST00000488426 ZNF506Q5JVG8 444 aa10□□□□□ -0.81
NELFE-209ENST00000488426 OR4X1Q8NH49 305 aa10□□□□□ -0.81
NELFE-209ENST00000488426 THYN1Q9P016 225 aa10□□□□□ -0.81
NELFE-209ENST00000488426 K7EIM0 57 aa9.99□□□□□ -0.81
NELFE-209ENST00000488426 ATP6V0E1O15342 81 aa9.99□□□□□ -0.81
NELFE-209ENST00000488426 IGHV3-48P01763 117 aa9.99□□□□□ -0.81
NELFE-209ENST00000488426 TAGLN2P37802 199 aaKnown RBP9.99□□□□□ -0.81
NELFE-209ENST00000488426 FGF8P55075 233 aaPredicted RBP9.99□□□□□ -0.81
NELFE-209ENST00000488426 KLK9Q2XQG4 91 aa9.99□□□□□ -0.81
NELFE-209ENST00000488426 KHDC3LQ587J8 217 aa9.99□□□□□ -0.81
NELFE-209ENST00000488426 C10orf91Q5T1B1 145 aa9.99□□□□□ -0.81
NELFE-209ENST00000488426 TEX29Q8N6K0 151 aa9.99□□□□□ -0.81
NELFE-209ENST00000488426 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms