RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 OR5AU1Q8NGC0 362 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 ST8SIA2Q92186 375 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 GINS3Q9BRX5 216 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 LSM4Q9Y4Z0 139 aaKnown RBP8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 RNF114Q9Y508 228 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 TIMM9Q9Y5J7 89 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 IGHV3-21A0A0B4J1V1 117 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 MFSD2BA6NFX1 497 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 NUPL2O15504 423 aaKnown RBP8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 MDKP21741 143 aaPredicted RBP8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 OR10J1P30954 320 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 CAMLGP49069 296 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 FOXL1Q12952 345 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 MLANAQ16655 118 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 SPSB3Q6PJ21 355 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 HSD17B11Q8NBQ5 300 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 ZNF502Q8TBZ5 544 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 WFDC12Q8WWY7 111 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 TRGV9Q99603 122 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 PSMG3Q9BT73 122 aaPredicted RBP8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 NPCDR1Q9BY65 106 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 ARV1Q9H2C2 271 aa8.22□□□□□ -1.09
HLA-DMB-261ENST00000487996 CFDP00746 253 aaPredicted RBP8.21□□□□□ -1.09
HLA-DMB-261ENST00000487996 IGHV3-48P01763 117 aa8.21□□□□□ -1.09
HLA-DMB-261ENST00000487996 SEC11BP0C7V7 166 aa8.21□□□□□ -1.09
HLA-DMB-261ENST00000487996 SERF2P84101 59 aa8.21□□□□□ -1.09
HLA-DMB-261ENST00000487996 MYOZ3Q8TDC0 251 aa8.21□□□□□ -1.09
HLA-DMB-261ENST00000487996 UBE2E2Q96LR5 201 aa8.21□□□□□ -1.09
HLA-DMB-261ENST00000487996 KLK15Q9H2R5 256 aa8.21□□□□□ -1.09
HLA-DMB-261ENST00000487996 CUBNO60494 3623 aa8.21□□□□□ -1.1
HLA-DMB-261ENST00000487996 TCRBV4S1A1TA0A5B7 111 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 AGPAT2O15120 278 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 IFNA7P01567 189 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 IGLC1P0CG04 106 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 SPP1P10451 314 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 ATP6V0CP27449 155 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 RPL29P47914 159 aaKnown RBP8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 ZNF343Q6P1L6 599 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 ZNF491Q8N8L2 437 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 MGST2Q99735 147 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 GGTLC1Q9BX51 225 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 UMAD1C9J7I0 102 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 TSPAN15O95858 294 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 MBP02144 154 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 RPLP1P05386 114 aaKnown RBP8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 CLEC3BP05452 202 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 GPR183P32249 361 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 PROK1P58294 105 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 YPEL3P61236 119 aaPredicted RBP8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 DEFA5Q01523 94 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 RELQ04864 619 aaPredicted RBP8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 CLEC19AQ6UXS0 136 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 Q6ZRG5 221 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 CYP2G1PQ6ZSU1 146 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 PRIMA1Q86XR5 153 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 BPIFCQ8NFQ6 507 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 OR2G3Q8NGZ4 309 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 WIPF2Q8TF74 440 aaPredicted RBP8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 CCDC140Q96MF4 163 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 SLC25A32Q9H2D1 315 aa8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 MRPL36Q9P0J6 103 aaKnown RBP8.2□□□□□ -1.1
HLA-DMB-261ENST00000487996 IGKV1OR2-108A0A075B7D4 117 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 OR2T8A6NH00 312 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 TGOLN2O43493 480 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 S100A7P31151 101 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 CDX1P47902 265 aaPredicted RBP8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 RAB5CP51148 216 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 B2MP61769 119 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 RUNX1Q01196 453 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 ZNF616Q08AN1 781 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 KHDC1LQ5JSQ8 128 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 AKR1C8PQ5T2L2 129 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 PXDC1Q5TGL8 231 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 TEX261Q6UWH6 196 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 C10orf99Q6UWK7 81 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 S100A7AQ86SG5 101 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 RSG1Q9BU20 258 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 ZMAT5Q9UDW3 170 aaKnown RBP8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 SLC45A2Q9UMX9 530 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 S4R3C0 116 aa8.19□□□□□ -1.1
HLA-DMB-261ENST00000487996 IGKV1D-37A0A075B6S9 117 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 F8W735 103 aaPredicted RBP8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 TOMM40O96008 361 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 IGKV1-17P01599 117 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 IGHV3-11P01762 117 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 IGHV3-23P01764 117 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 CTSGP08311 255 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 LGALS1P09382 135 aaKnown RBP8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 RD3LP0DJH9 198 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 ARL3P36405 182 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 SMUG1Q53HV7 270 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 LCNL1Q6ZST4 164 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 STPG3Q8N7X2 389 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 OR51G1Q8NGK1 321 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 Q8WTZ3 238 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 C4orf3Q8WVX3 66 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 TMED6Q8WW62 240 aa8.18□□□□□ -1.1
HLA-DMB-261ENST00000487996 C19orf24Q9BVV8 132 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms