RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 TRAV26-2A0A0B4J265 109 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 FAM236DA0A1B0GTK5 79 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 OR4C46A6NHA9 309 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 ZNF736B4DX44 427 aaPredicted RBP0.45□□□□□ -2.34
PTEN-204ENST00000487939 PIRO00625 290 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 IFNA16P05015 189 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 FAM236CP0DP71 79 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 TEX261Q6UWH6 196 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 KRT222Q8N1A0 295 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 ITFG2Q969R8 447 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 DCUN1D1Q96GG9 259 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 C8orf76Q96K31 380 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 OSTCQ9NRP0 149 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 U3KQ87 197 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 ROBO3Q96MS0 1386 aa0.45□□□□□ -2.34
PTEN-204ENST00000487939 CCDC160A6NGH7 325 aa0.44□□□□□ -2.34
PTEN-204ENST00000487939 C1orf196B1AJZ1 125 aa0.44□□□□□ -2.34
PTEN-204ENST00000487939 LYPLA2O95372 231 aa0.44□□□□□ -2.34
PTEN-204ENST00000487939 S100A4P26447 101 aaKnown RBP0.44□□□□□ -2.34
PTEN-204ENST00000487939 DEFA3P59666 94 aa0.44□□□□□ -2.34
PTEN-204ENST00000487939 SRSF6Q13247 344 aaKnown RBP0.44□□□□□ -2.34
PTEN-204ENST00000487939 ACOT6Q3I5F7 207 aaPredicted RBP0.44□□□□□ -2.34
PTEN-204ENST00000487939 CLECL1Q8IZS7 167 aa0.44□□□□□ -2.34
PTEN-204ENST00000487939 OR13D1Q8NGV5 346 aa0.44□□□□□ -2.34
PTEN-204ENST00000487939 PATE1Q8WXA2 126 aa0.44□□□□□ -2.34
PTEN-204ENST00000487939 C20orf27Q9GZN8 174 aa0.44□□□□□ -2.34
PTEN-204ENST00000487939 MRPL27Q9P0M9 148 aaKnown RBP0.44□□□□□ -2.34
PTEN-204ENST00000487939 V9GYY5 206 aaPredicted RBP0.44□□□□□ -2.34
PTEN-204ENST00000487939 OBSL1O75147 1896 aa0.44□□□□□ -2.34
PTEN-204ENST00000487939 SCN8AQ9UQD0 1980 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 NEO1Q92859 1461 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 ALPK3Q96L96 1907 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 CLDN24A6NM45 220 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 M0R036 132 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 DNAL4O96015 105 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 SMIM10L2AP0DMW4 78 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 SMIM10L2BP0DMW5 78 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 YPEL3P61236 119 aaPredicted RBP0.43□□□□□ -2.34
PTEN-204ENST00000487939 SPRNQ5BIV9 151 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 CLDN22Q8N7P3 220 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 LINC00301Q8NCQ3 95 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 TEX47Q8TBZ9 253 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 VPS29Q9UBQ0 182 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 EPDR1Q9UM22 224 aa0.43□□□□□ -2.34
PTEN-204ENST00000487939 MED1Q15648 1581 aaPredicted RBP0.43□□□□□ -2.34
PTEN-204ENST00000487939 CHD3Q12873 2000 aaKnown RBP0.42□□□□□ -2.34
PTEN-204ENST00000487939 PLXNA4Q9HCM2 1894 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 C7orf71A4D174 169 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 CNIH1O95406 144 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 RPS17P08708 135 aaKnown RBP0.42□□□□□ -2.34
PTEN-204ENST00000487939 RBP1P09455 135 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 LINC01554Q52M75 96 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 BRMS1LQ5PSV4 323 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 WFDC5Q8TCV5 224 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 CCDC42Q96M95 316 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 CMSS1Q9BQ75 279 aaKnown RBP0.42□□□□□ -2.34
PTEN-204ENST00000487939 CCDC90BQ9GZT6 254 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 DCSTAMPQ9H295 470 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 UBAP1Q9NZ09 502 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 CYSLTR1Q9Y271 337 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 KIF1BO60333 1816 aa0.42□□□□□ -2.34
PTEN-204ENST00000487939 MED12Q93074 2177 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 TTRP02766 147 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 SERPINA6P08185 405 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 OR4E1P0C645 316 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 SMIM17P0DL12 118 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 CASP1P29466 404 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 RHOBP62745 196 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 IMPG1Q17R60 797 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 GKN2Q86XP6 184 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 TRAPPC5Q8IUR0 188 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 C6orf62Q9GZU0 229 aaPredicted RBP0.41□□□□□ -2.34
PTEN-204ENST00000487939 C14orf105Q9NVL8 296 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 UTP11Q9Y3A2 253 aaKnown RBP0.41□□□□□ -2.34
PTEN-204ENST00000487939 ASCC3Q8N3C0 2202 aaKnown RBP0.41□□□□□ -2.34
PTEN-204ENST00000487939 KIAA1549Q9HCM3 1950 aa0.41□□□□□ -2.34
PTEN-204ENST00000487939 USP24Q9UPU5 2620 aa0.4□□□□□ -2.34
PTEN-204ENST00000487939 RIMBP3CA6NJZ7 1639 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 RIMBP3BA6NNM3 1639 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 RIMBP3Q9UFD9 1639 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 hCG_1818297A0A087WSY0 165 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 A0A087X0T9 212 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 hADV38S2A0JD32 116 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 SMIM23A6NLE4 172 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 A8MT66 165 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 PSG9Q00887 426 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 TSNQ15631 228 aaKnown RBP0.4□□□□□ -2.35
PTEN-204ENST00000487939 ESRGQ1W209 222 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 C12orf74Q32Q52 190 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 FAM74A1Q5RGS3 127 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 PTRHD1Q6GMV3 140 aaKnown RBP0.4□□□□□ -2.35
PTEN-204ENST00000487939 GDPD1Q8N9F7 314 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 OR8D4Q8NGM9 314 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 HIST1H2BLQ99880 126 aa0.4□□□□□ -2.35
PTEN-204ENST00000487939 ARHGEF28Q8N1W1 1705 aaKnown RBP0.4□□□□□ -2.35
PTEN-204ENST00000487939 MYO3BQ8WXR4 1341 aa0.39□□□□□ -2.35
PTEN-204ENST00000487939 PIK3C2GO75747 1445 aa0.39□□□□□ -2.35
PTEN-204ENST00000487939 GADD45GO95257 159 aa0.39□□□□□ -2.35
PTEN-204ENST00000487939 SERPINE1P05121 402 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms