RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 CEBPGP53567 150 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 RANP62826 216 aaKnown RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 RPS25P62851 125 aaKnown RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 FKBP1AP62942 108 aaKnown RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 PRDX4Q13162 271 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 RSU1Q15404 277 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 OR4D1Q15615 310 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 CST6Q15828 149 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 USF2Q15853 346 aaPredicted RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 MESTQ5EB52 335 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 SYPL2Q5VXT5 272 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 SFXN4Q6P4A7 337 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 RPL22L1Q6P5R6 122 aaKnown RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 HEPN1Q6WQI6 88 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 SSX6Q7RTT6 188 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 SLC36A1Q7Z2H8 476 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 BAP18Q8IXM2 172 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 FER1L6-AS1Q8NA97 138 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 ACBD4Q8NC06 268 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 LFNGQ8NES3 379 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 OR5AK2Q8NH90 309 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 OR2AE1Q8NHA4 323 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 ZMYND19Q96E35 227 aaPredicted RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 NIPSNAP1Q9BPW8 284 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 SLC25A21Q9BQT8 299 aaPredicted RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 ACBD6Q9BR61 282 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 FXYD6Q9H0Q3 95 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 OR51B6Q9H340 312 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 LRTM1Q9HBL6 345 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 HRASLSQ9HDD0 168 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 NRBP2Q9NSY0 501 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 ACER3Q9NUN7 267 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 COMMD9Q9P000 198 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 CACFD1Q9UGQ2 172 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 CLEC2DQ9UHP7 191 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 RPUSD1Q9UJJ7 312 aaKnown RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 LINC00588Q9Y4M8 146 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 MYO18AQ92614 2054 aaKnown RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 DOCK5Q9H7D0 1870 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 ZNF831Q5JPB2 1677 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 C7orf77A4D0Y5 90 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 MGAT4DA6NG13 374 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 B4DEV8 164 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 C9J4A7 227 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 PPP5D1E7EU14 171 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 RNASEK-C17orf49H0YIS7 233 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 CDIPTO14735 213 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 LECT2O14960 151 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 ADAP1O75689 374 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 UCHL1P09936 223 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 SFTA3P0C7M3 94 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 GIMD1P0DJR0 217 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 NQO2P16083 231 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 ZNF25P17030 456 aaPredicted RBP1.96□□□□□ -2.1
USP48-209ENST00000487880 TSPOP30536 169 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 IFNGR2P38484 337 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 SULT1A2P50226 295 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 CLDN12P56749 244 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 LSM6P62312 80 aaKnown RBP1.96□□□□□ -2.1
USP48-209ENST00000487880 RPL38P63173 70 aaKnown RBP1.96□□□□□ -2.1
USP48-209ENST00000487880 TSPAN31Q12999 210 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 SURF2Q15527 256 aaPredicted RBP1.96□□□□□ -2.1
USP48-209ENST00000487880 IQCJQ1A5X6 159 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 AKR1C8PQ5T2L2 129 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 NOXRED1Q6NXP6 359 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 Q6ZT83 130 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 RPS27LQ71UM5 84 aaKnown RBP1.96□□□□□ -2.1
USP48-209ENST00000487880 NIT1Q86X76 327 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 HIST3H2BBQ8N257 126 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 LRRC18Q8N456 261 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 KRTCAP2Q8N6L1 136 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 OR4E2Q8NGC2 313 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 NEK7Q8TDX7 302 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 LMX1AQ8TE12 382 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 CASTOR1Q8WTX7 329 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 TNFAIP8L1Q8WVP5 186 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 DNAJB3Q8WWF6 145 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 TMEM208Q9BTX3 173 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 DDA1Q9BW61 102 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 ZNF471Q9BX82 626 aaPredicted RBP1.96□□□□□ -2.1
USP48-209ENST00000487880 OR8D2Q9GZM6 311 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 TPT1P8Q9HAU6 139 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 TREM1Q9NP99 234 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 TMEM242Q9NWH2 141 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 DOK5Q9P104 306 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 OR52A1Q9UKL2 312 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 ANGPT4Q9Y264 503 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 ZFP30Q9Y2G7 519 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 SNX10Q9Y5X0 201 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 BTAF1O14981 1849 aa1.96□□□□□ -2.1
USP48-209ENST00000487880 TRAV14DV4A0A0A6YYC5 116 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 A0A0A6YYH2 397 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 A6NJ64 397 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 OR1I1O60431 355 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 IGF2P01344 180 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 AKAIN1P0CW23 69 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 PET100P0DJ07 73 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 PSMB6P28072 239 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 CD200P41217 278 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 GABRA4P48169 554 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms