RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 WHAMMP3Q1A5X7 153 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 RPL39P5Q59GN2 51 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 TMEM69Q5SWH9 247 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 SYT6Q5T7P8 510 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-217ENST00000487825 LPCAT4Q643R3 524 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 SSX7Q7RTT5 188 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 PDPNQ86YL7 162 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 SELENOHQ8IZQ5 122 aaKnown RBP2.99□□□□□ -1.93
BRCA1-217ENST00000487825 GAPTQ8N292 157 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 TTC9CQ8N5M4 171 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 PXT1Q8NFP0 134 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 OR1L4Q8NGR5 311 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 EEF1AKMT3Q96AZ1 226 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 CCDC124Q96CT7 223 aaKnown RBP2.99□□□□□ -1.93
BRCA1-217ENST00000487825 UPK3BQ9BT76 320 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 ZNF586Q9NXT0 402 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 ZNF257Q9Y2Q1 563 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 RBMX2Q9Y388 322 aaKnown RBP2.99□□□□□ -1.93
BRCA1-217ENST00000487825 TMEM14AQ9Y6G1 99 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 V9GYQ6 96 aa2.99□□□□□ -1.93
BRCA1-217ENST00000487825 TRBV7-1A0A0A6YYK4 115 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 IGHV3-35A0A0C4DH35 117 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 LOC107986453A0A1B0GWG9 222 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 RAB19A4D1S5 217 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 MAGEB4O15481 346 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-217ENST00000487825 OR7C1O76099 320 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-217ENST00000487825 REG1AP05451 166 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 FCER2P06734 321 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 SERPINE2P07093 398 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 MRPL3P09001 348 aaKnown RBP2.98□□□□□ -1.93
BRCA1-217ENST00000487825 RCC1P18754 421 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-217ENST00000487825 CBX5P45973 191 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 TFPI2P48307 235 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 ALDH3B2P48448 385 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 DEFB131AP59861 70 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 GK3PQ14409 553 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 KLK9Q2XQG4 91 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 LINC01620Q4KN68 170 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 DNAL1Q4LDG9 190 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 COQ5Q5HYK3 327 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 FAM222AQ5U5X8 452 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 ZNF322Q6U7Q0 402 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-217ENST00000487825 Q6ZSA8 131 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 H2BFWTQ7Z2G1 175 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 OR10AC1Q8NH08 325 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 OR4K15Q8NH41 348 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 OR2A7Q96R45 310 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 RNF2Q99496 336 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 APOL4Q9BPW4 351 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 HINT2Q9BX68 163 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 SAV1Q9H4B6 383 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-217ENST00000487825 TAF9BQ9HBM6 251 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 NAGKQ9UJ70 344 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 KLK9Q9UKQ9 250 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 TRAPPC2LQ9UL33 140 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 ST3GAL6Q9Y274 331 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 S4R3C0 116 aa2.98□□□□□ -1.93
BRCA1-217ENST00000487825 ZNF705FA8MVS1 300 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-217ENST00000487825 K7EMT4 169 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 NDUFAB1O14561 156 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 MAS1P04201 325 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 OCM2P0CE71 109 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 OCMP0CE72 109 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-217ENST00000487825 UBCP0CG48 685 aaKnown RBP2.97□□□□□ -1.93
BRCA1-217ENST00000487825 ZNF705DP0CH99 300 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-217ENST00000487825 ZNF705BP0CI00 300 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-217ENST00000487825 GNRHRP30968 328 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 EMP1P54849 157 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 RBM11P57052 281 aaKnown RBP2.97□□□□□ -1.93
BRCA1-217ENST00000487825 CXCR4P61073 352 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 IFFO1Q0D2I5 559 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 KISS1Q15726 138 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 TNXAQ16473 311 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 MPV17LQ2QL34 196 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 ZNF705AQ6ZN79 300 aaPredicted RBP2.97□□□□□ -1.93
BRCA1-217ENST00000487825 C19orf35Q6ZS72 473 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 STX19Q8N4C7 294 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 OR10H4Q8NGA5 316 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 OR10K1Q8NGX5 313 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 OR6F1Q8NGZ6 308 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 NEK7Q8TDX7 302 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 GTSF1Q8WW33 167 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 MRPL53Q96EL3 112 aaKnown RBP2.97□□□□□ -1.93
BRCA1-217ENST00000487825 ABHD14BQ96IU4 210 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 SPIN2AQ99865 258 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 SPIN2BQ9BPZ2 258 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 FLVCR2Q9UPI3 526 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 GMPPBQ9Y5P6 360 aa2.97□□□□□ -1.93
BRCA1-217ENST00000487825 IGKV3-7A0A075B6H7 116 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 A0A0A6YYH2 397 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 TRAV2A0A0B4J234 112 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 CCDC182A6NF36 153 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 SMIM9A6NGZ8 99 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 FBLL1A6NHQ2 334 aaKnown RBP2.96□□□□□ -1.94
BRCA1-217ENST00000487825 A6NJ64 397 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 FOXI3A8MTJ6 420 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-217ENST00000487825 TEX46H3BTG2 121 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 H3BTX0 84 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 NDUFA4O00483 81 aa2.96□□□□□ -1.94
BRCA1-217ENST00000487825 MRASO14807 208 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms