RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 NUTF2P61970 127 aaKnown RBP11.34□□□□□ -0.59
TOM1-214ENST00000487670 ARL6IP1Q15041 203 aa11.34□□□□□ -0.59
TOM1-214ENST00000487670 CTF1Q16619 201 aa11.34□□□□□ -0.59
TOM1-214ENST00000487670 IDNKQ5T6J7 187 aa11.34□□□□□ -0.59
TOM1-214ENST00000487670 GPR107Q5VW38 600 aa11.34□□□□□ -0.59
TOM1-214ENST00000487670 SLC25A38Q96DW6 304 aa11.34□□□□□ -0.59
TOM1-214ENST00000487670 GABARAPO95166 117 aa11.33□□□□□ -0.6
TOM1-214ENST00000487670 SEC22AQ96IW7 307 aa11.33□□□□□ -0.6
TOM1-214ENST00000487670 GPR141Q7Z602 305 aa11.32□□□□□ -0.6
TOM1-214ENST00000487670 RHBDL2Q9NX52 303 aa11.32□□□□□ -0.6
TOM1-214ENST00000487670 TEX48A0A1B0GUV7 120 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 F6UB75 175 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 CLN5O75503 358 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 RNASE2P10153 161 aaKnown RBP11.31□□□□□ -0.6
TOM1-214ENST00000487670 RANBP1P43487 201 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 KRTAP10-1P60331 282 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 HERV-K104P61576 105 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 FCN2Q15485 313 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 USF2Q15853 346 aaPredicted RBP11.31□□□□□ -0.6
TOM1-214ENST00000487670 CADM3Q8N126 398 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 RNF141Q8WVD5 230 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 TMEM230Q96A57 120 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 UHRF2Q96PU4 802 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 FKBP11Q9NYL4 201 aa11.31□□□□□ -0.6
TOM1-214ENST00000487670 TRAV18A0A075B6X5 111 aa11.3□□□□□ -0.6
TOM1-214ENST00000487670 BTF3P20290 206 aaKnown RBP11.3□□□□□ -0.6
TOM1-214ENST00000487670 RFX2P48378 723 aa11.3□□□□□ -0.6
TOM1-214ENST00000487670 PHLDA2Q53GA4 152 aa11.3□□□□□ -0.6
TOM1-214ENST00000487670 SSX7Q7RTT5 188 aa11.3□□□□□ -0.6
TOM1-214ENST00000487670 FRZBQ92765 325 aa11.3□□□□□ -0.6
TOM1-214ENST00000487670 MRGPRFQ96AM1 343 aa11.3□□□□□ -0.6
TOM1-214ENST00000487670 WDR12Q9GZL7 423 aaKnown RBP11.3□□□□□ -0.6
TOM1-214ENST00000487670 HBE1P02100 147 aa11.29□□□□□ -0.6
TOM1-214ENST00000487670 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
TOM1-214ENST00000487670 SNRPD3P62318 126 aaKnown RBP11.29□□□□□ -0.6
TOM1-214ENST00000487670 OR5AP2Q8NGF4 316 aa11.29□□□□□ -0.6
TOM1-214ENST00000487670 OR4B1Q8NGF8 309 aa11.29□□□□□ -0.6
TOM1-214ENST00000487670 OR4A16Q8NH70 328 aa11.29□□□□□ -0.6
TOM1-214ENST00000487670 ZNF2Q9BSG1 426 aaPredicted RBP11.29□□□□□ -0.6
TOM1-214ENST00000487670 SAV1Q9H4B6 383 aaPredicted RBP11.29□□□□□ -0.6
TOM1-214ENST00000487670 Q9H8V8 135 aa11.29□□□□□ -0.6
TOM1-214ENST00000487670 NRN1Q9NPD7 142 aa11.29□□□□□ -0.6
TOM1-214ENST00000487670 EHFQ9NZC4 300 aa11.29□□□□□ -0.6
TOM1-214ENST00000487670 F5H768 121 aa11.28□□□□□ -0.6
TOM1-214ENST00000487670 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
TOM1-214ENST00000487670 DEFB130BP0DP73 79 aa11.28□□□□□ -0.6
TOM1-214ENST00000487670 DEFB130AP0DP74 79 aa11.28□□□□□ -0.6
TOM1-214ENST00000487670 RPL5P46777 297 aaKnown RBP11.28□□□□□ -0.6
TOM1-214ENST00000487670 SCAND1P57086 179 aa11.28□□□□□ -0.6
TOM1-214ENST00000487670 ERHP84090 104 aaKnown RBP11.28□□□□□ -0.6
TOM1-214ENST00000487670 SPCS2Q15005 226 aa11.28□□□□□ -0.6
TOM1-214ENST00000487670 Q6ZRN7 208 aaPredicted RBP11.28□□□□□ -0.6
TOM1-214ENST00000487670 CLVS1Q8IUQ0 354 aaPredicted RBP11.28□□□□□ -0.6
TOM1-214ENST00000487670 OR4X1Q8NH49 305 aa11.28□□□□□ -0.6
TOM1-214ENST00000487670 TSC22D3Q99576 134 aa11.28□□□□□ -0.6
TOM1-214ENST00000487670 PLAC8L1A1L4L8 177 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 ZNF705GA8MUZ8 300 aaPredicted RBP11.27□□□□□ -0.61
TOM1-214ENST00000487670 J3QL48 77 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 ELK1P19419 428 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 NKX2-1P43699 371 aaPredicted RBP11.27□□□□□ -0.61
TOM1-214ENST00000487670 CCL18P55774 89 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 ZNF79Q15937 498 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 RRN3P1Q2M238 152 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 SIGLEC15Q6ZMC9 328 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 H2BFWTQ7Z2G1 175 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 CROCCP3Q8IVE0 287 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 NARS2Q96I59 477 aaKnown RBP11.27□□□□□ -0.61
TOM1-214ENST00000487670 C7orf50Q9BRJ6 194 aaKnown RBP11.27□□□□□ -0.61
TOM1-214ENST00000487670 Q9H3A6 140 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 ZNF586Q9NXT0 402 aa11.27□□□□□ -0.61
TOM1-214ENST00000487670 PMP2P02689 132 aa11.26□□□□□ -0.61
TOM1-214ENST00000487670 IGLC1P0CG04 106 aa11.26□□□□□ -0.61
TOM1-214ENST00000487670 OPRK1P41145 380 aa11.26□□□□□ -0.61
TOM1-214ENST00000487670 RORCP51449 518 aa11.26□□□□□ -0.61
TOM1-214ENST00000487670 DHODHQ02127 395 aa11.26□□□□□ -0.61
TOM1-214ENST00000487670 SAMD12Q8N8I0 201 aa11.26□□□□□ -0.61
TOM1-214ENST00000487670 C17orf77Q96MU5 243 aa11.26□□□□□ -0.61
TOM1-214ENST00000487670 LINC00052Q96N35 136 aa11.26□□□□□ -0.61
TOM1-214ENST00000487670 AUNIPQ9H7T9 357 aa11.26□□□□□ -0.61
TOM1-214ENST00000487670 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
TOM1-214ENST00000487670 GPR31O00270 319 aa11.25□□□□□ -0.61
TOM1-214ENST00000487670 TMEM127O75204 238 aa11.25□□□□□ -0.61
TOM1-214ENST00000487670 NXPH3O95157 252 aa11.25□□□□□ -0.61
TOM1-214ENST00000487670 LINC00315P59091 139 aa11.25□□□□□ -0.61
TOM1-214ENST00000487670 UBE2NLQ5JXB2 153 aa11.25□□□□□ -0.61
TOM1-214ENST00000487670 PKHD1L1Q86WI1 4243 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 SOCS3O14543 225 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 BUB3O43684 328 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 SCGNO76038 276 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 IGKV1-5P01602 117 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 DNAH10OSP0CZ25 163 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 AZU1P20160 251 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 SNCAP37840 140 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 EIF2B2P49770 351 aaKnown RBP11.24□□□□□ -0.61
TOM1-214ENST00000487670 FAM78BQ5VT40 261 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 DHRS11Q6UWP2 260 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 FOXI2Q6ZQN5 318 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 TBC1D26Q86UD7 250 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 RAB2BQ8WUD1 216 aa11.24□□□□□ -0.61
TOM1-214ENST00000487670 SEPSECSQ9HD40 501 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms