RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TRAV5A0A0B4J249 113 aa9.63□□□□□ -0.87
TRA2B-214ENST00000487615 AREGP15514 252 aa9.63□□□□□ -0.87
TRA2B-214ENST00000487615 RAB9AP51151 201 aa9.63□□□□□ -0.87
TRA2B-214ENST00000487615 ST6GALNAC3Q8NDV1 305 aa9.63□□□□□ -0.87
TRA2B-214ENST00000487615 Q9H3A6 140 aa9.63□□□□□ -0.87
TRA2B-214ENST00000487615 MMP23AO75900 390 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 OR5AL1P0C617 328 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 TMEM155Q4W5P6 130 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 TCF23Q7RTU1 214 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 ATG2AQ2TAZ0 1938 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 C9JCJ5 164 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 YTHDF2Q9Y5A9 579 aaKnown RBP9.62□□□□□ -0.87
TRA2B-214ENST00000487615 IGKV3-7A0A075B6H7 116 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 COL8A2P25067 703 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 NHLH1Q02575 133 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 FOXL1Q12952 345 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 Q6ZN92 141 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 SEM1Q6ZVN7 128 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 MAP1LC3CQ9BXW4 147 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 FBXL7Q9UJT9 491 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 SMIM17P0DL12 118 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 HBBP68871 147 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 MLANAQ16655 118 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 FMC1Q96HJ9 113 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 CLEC5AQ9NY25 188 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 EPDR1Q9UM22 224 aa9.62□□□□□ -0.87
TRA2B-214ENST00000487615 LEMD1Q68G75 181 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 PVRIGQ6DKI7 326 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 RNF5Q99942 180 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 ATG101Q9BSB4 218 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 BUB1B-PAK6H3BSN5 160 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 GNG5P63218 68 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 TMEM78Q5T7P6 136 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 ZNF833PQ6ZTB9 187 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 HIST3H2BBQ8N257 126 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 OR5AN1Q8NGI8 311 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 SIGLEC9Q9Y336 463 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 UFC1Q9Y3C8 167 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 COL4A2P08572 1712 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 PF4V1P10720 104 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 HSPB8Q9UJY1 196 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 CUL9Q8IWT3 2517 aa9.61□□□□□ -0.87
TRA2B-214ENST00000487615 LHBP01229 141 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 HLA-DRB1P01911 266 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 LOXP28300 417 aaPredicted RBP9.6□□□□□ -0.87
TRA2B-214ENST00000487615 FAM209BQ5JX69 171 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 GFI1BQ5VTD9 330 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 IZUMO1RA6ND01 250 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 IGHV3-23P01764 117 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 DLX6P56179 175 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 RNF125Q96EQ8 232 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 IGHV3OR16-10A0A075B7F0 116 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 SPRNQ5BIV9 151 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 TPTE2P1Q5T6R2 138 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 EEF1AKMT3Q96AZ1 226 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 HIST1H2BLQ99880 126 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 RPP21Q9H633 154 aaKnown RBP9.6□□□□□ -0.87
TRA2B-214ENST00000487615 OTORQ9NRC9 128 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 LY6HO94772 140 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 ADMP35318 185 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 POU2AF1Q16633 256 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 OR4B1Q8NGF8 309 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 C8orf46Q8TAG6 207 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 TRGV9Q99603 122 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 CCL19Q99731 98 aa9.6□□□□□ -0.87
TRA2B-214ENST00000487615 GGCTO75223 188 aaKnown RBP9.59□□□□□ -0.87
TRA2B-214ENST00000487615 SAPCD1Q5SSQ6 148 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 CDC42EP3Q9UKI2 254 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 LY96Q9Y6Y9 160 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 HIGD1CA8MV81 97 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 J3KRW8 73 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 CENPVQ7Z7K6 275 aaPredicted RBP9.59□□□□□ -0.87
TRA2B-214ENST00000487615 C16orf92Q96LL3 132 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 NDUFA4L2Q9NRX3 87 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 PTPRQQ9UMZ3 2332 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 F11RQ9Y624 299 aaKnown RBP9.59□□□□□ -0.87
TRA2B-214ENST00000487615 A0A1W2PPI3 338 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 IGLV2-14P01704 120 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 SOD3P08294 240 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 RELQ04864 619 aaPredicted RBP9.59□□□□□ -0.87
TRA2B-214ENST00000487615 ATP5G2Q06055 141 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 GUSBP1Q15486 140 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 CREBBPQ92793 2442 aa9.59□□□□□ -0.87
TRA2B-214ENST00000487615 EXPH5Q8NEV8 1989 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 M0QZK8 103 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 NPPCP23582 126 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 GPR183P32249 361 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 LINC00311Q8N616 119 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 C5orf42Q9H799 3197 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 CPAMD8Q8IZJ3 1885 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 PSG1P11464 419 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 RPS20P60866 119 aaKnown RBP9.58□□□□□ -0.88
TRA2B-214ENST00000487615 LY6EQ16553 131 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 SIAH2O43255 324 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 KLRD1Q13241 179 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 TWIST1Q15672 202 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 FAM168AQ92567 244 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 GSX1Q9H4S2 264 aaPredicted RBP9.58□□□□□ -0.88
TRA2B-214ENST00000487615 A0A1W2PS18 150 aa9.58□□□□□ -0.88
TRA2B-214ENST00000487615 LINC00587B1AMM8 73 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms