RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 CCDC153Q494R4 210 aa2.34□□□□□ -2.03
CUL3-211ENST00000487558 TOMM20LQ6UXN7 152 aa2.34□□□□□ -2.03
CUL3-211ENST00000487558 OR11H6Q8NGC7 330 aa2.34□□□□□ -2.03
CUL3-211ENST00000487558 HSPB9Q9BQS6 159 aa2.34□□□□□ -2.03
CUL3-211ENST00000487558 MAP1LC3BQ9GZQ8 125 aa2.34□□□□□ -2.03
CUL3-211ENST00000487558 TMEM138Q9NPI0 162 aa2.34□□□□□ -2.03
CUL3-211ENST00000487558 SS18L2Q9UHA2 77 aa2.34□□□□□ -2.03
CUL3-211ENST00000487558 OR52A1Q9UKL2 312 aa2.34□□□□□ -2.03
CUL3-211ENST00000487558 SSR3Q9UNL2 185 aa2.34□□□□□ -2.03
CUL3-211ENST00000487558 ROBO3Q96MS0 1386 aa2.34□□□□□ -2.04
CUL3-211ENST00000487558 COL5A3P25940 1745 aaPredicted RBP2.34□□□□□ -2.04
CUL3-211ENST00000487558 MIA2Q96PC5 1412 aa2.34□□□□□ -2.04
CUL3-211ENST00000487558 MAST2Q6P0Q8 1798 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 TRAPPC13A5PLN9 417 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 PRORSD1PA6NEY8 169 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 KPNA4O00629 521 aaPredicted RBP2.33□□□□□ -2.04
CUL3-211ENST00000487558 METTL15P1P0C7V9 234 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 SPI1P17947 270 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 TMEM128Q5BJH2 165 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 BRMS1LQ5PSV4 323 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 FAM24BQ8N5W8 94 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 GPR146Q96CH1 333 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 CGREF1Q99674 301 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 SH3BGRL3Q9H299 93 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 PARVBQ9HBI1 364 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 ACER3Q9NUN7 267 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 UQCC1Q9NVA1 299 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 GSKIPQ9P0R6 139 aa2.33□□□□□ -2.04
CUL3-211ENST00000487558 ARL5CA6NH57 179 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 H7C1C5 153 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 MFSD11O43934 449 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 C8GP07360 202 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 CDC42P60953 191 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 LCN6P62502 163 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 SURF2Q15527 256 aaPredicted RBP2.32□□□□□ -2.04
CUL3-211ENST00000487558 C12orf74Q32Q52 190 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 TMEM78Q5T7P6 136 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 TMEM106AQ96A25 262 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 GINS4Q9BRT9 223 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 RNASE7Q9H1E1 156 aaKnown RBP2.32□□□□□ -2.04
CUL3-211ENST00000487558 SLC39A9Q9NUM3 307 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 SPANXCQ9NY87 97 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 PRNDQ9UKY0 176 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 KIF13BQ9NQT8 1826 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 NCKAP5O14513 1909 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 BAHCC1Q9P281 2608 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 NEO1Q92859 1461 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 WDR7Q9Y4E6 1490 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 TOPBP1Q92547 1522 aa2.32□□□□□ -2.04
CUL3-211ENST00000487558 UBR2Q8IWV8 1755 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 ZNF106Q9H2Y7 1883 aaKnown RBP2.31□□□□□ -2.04
CUL3-211ENST00000487558 hCG_1818297A0A087WSY0 165 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 A8MT66 165 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 SDCBPO00560 298 aaPredicted RBP2.31□□□□□ -2.04
CUL3-211ENST00000487558 ZNF737O75373 536 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 APOA2P02652 100 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 NCALDP61601 193 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 GNG5P63218 68 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 KISS1Q15726 138 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 C7orf65Q6ZTY9 151 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 MIR17HGQ75NE6 70 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 COA5Q86WW8 74 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 BPIFA4PQ86YQ2 179 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 OR8B3Q8NGG8 313 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 DNAJC9Q8WXX5 260 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 MALSU1Q96EH3 234 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 LRTM1Q9HBL6 345 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 PAIP2BQ9ULR5 123 aaKnown RBP2.31□□□□□ -2.04
CUL3-211ENST00000487558 SETD5Q9C0A6 1442 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 SMARCA4P51532 1647 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 CPAMD8Q8IZJ3 1885 aa2.31□□□□□ -2.04
CUL3-211ENST00000487558 F8W036 122 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 IFNA7P01567 189 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 C1QBP02746 253 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 PPIBP23284 216 aaKnown RBP2.3□□□□□ -2.04
CUL3-211ENST00000487558 S100A1P23297 94 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 G6PCP35575 357 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 GLRXP35754 106 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 AKR1C3P42330 323 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 PSPHP78330 225 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 RHEBQ15382 184 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 DEFB115Q30KQ5 88 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 SCGB2B2Q4G0G5 96 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 CLVS1Q8IUQ0 354 aaPredicted RBP2.3□□□□□ -2.04
CUL3-211ENST00000487558 TERB2Q8NHR7 220 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 PFN4Q8NHR9 129 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 MBD3L1Q8WWY6 194 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 PFDN5Q99471 154 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 SERPINI1Q99574 410 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 EFCAB11Q9BUY7 163 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 CCDC32Q9BV29 185 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 CKLFQ9UBR5 152 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 BAIAP2Q9UQB8 552 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 HECW1Q76N89 1606 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 MPDZO75970 2070 aa2.3□□□□□ -2.04
CUL3-211ENST00000487558 PLXND1Q9Y4D7 1925 aa2.29□□□□□ -2.04
CUL3-211ENST00000487558 GADD45GO95257 159 aa2.29□□□□□ -2.04
CUL3-211ENST00000487558 ZNF682O95780 498 aa2.29□□□□□ -2.04
CUL3-211ENST00000487558 GPX2P18283 190 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms