RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 SLC35B1P78383 322 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 DHODHQ02127 395 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 TMEM267Q0VDI3 215 aaPredicted RBP4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 TMEM187Q14656 261 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 ECSCRQ19T08 205 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 C19orf35Q6ZS72 473 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 NDUFA11Q86Y39 141 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 SELENOHQ8IZQ5 122 aaKnown RBP4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 OR4X2Q8NGF9 303 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 OR4A5Q8NH83 315 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 VSTM2AQ8TAG5 236 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 SRSF12Q8WXF0 261 aaKnown RBP4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 DEDD2Q8WXF8 326 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 S100ZQ8WXG8 99 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 SLC25A21Q9BQT8 299 aaPredicted RBP4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 GON7Q9BXV9 100 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 NAA60Q9H7X0 242 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 SRD5A3Q9H8P0 318 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 COMMD9Q9P000 198 aa4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 C14orf166Q9Y224 244 aaKnown RBP4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 TSSC4Q9Y5U2 329 aaPredicted RBP4.73□□□□□ -1.65
RTFDC1-209ENST00000487211 IGHV4-4A0A075B6R2 117 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 A0A0G2JRQ6 117 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 NAP1L6A6NFF2 107 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 NDUFB6O95139 128 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 PRH1P02810 166 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 AREGP15514 252 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 HLA-GP17693 338 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 MAS1LP35410 378 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 RPL27AP46776 148 aaKnown RBP4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 RPL23AP62750 156 aaKnown RBP4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 ZNF846Q147U1 533 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 SLC25A42Q86VD7 318 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 TTC9CQ8N5M4 171 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 COMMD1Q8N668 190 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 ZNF491Q8N8L2 437 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 CCDC71LQ8N9Z2 235 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 OR10W1Q8NGF6 305 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 MYOZ3Q8TDC0 251 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 GPR146Q96CH1 333 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 GALNT14Q96FL9 552 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 TMEM56Q96MV1 263 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 SCGB3A2Q96PL1 93 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 DUX3Q96PT4 197 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 CCDC32Q9BV29 185 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 TMEM222Q9H0R3 208 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 TBC1D24Q9ULP9 559 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 FOXA2Q9Y261 457 aaPredicted RBP4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 TMEM56-RWDD3S4R434 201 aa4.72□□□□□ -1.65
RTFDC1-209ENST00000487211 IGLC7A0M8Q6 106 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 CENPXA8MT69 81 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 E5RGE8 158 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 I3L521 148 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 LYRM1O43325 122 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 B3GALNT1O75752 331 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 UPK1BO75841 260 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 BRI3O95415 125 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 AMBPP02760 352 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 TCRBP04435 133 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 REG1AP05451 166 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 CRYGCP07315 174 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 SLC6A1P30531 599 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 ERVK-16P61578 105 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 DEFA5Q01523 94 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 TRIM16LQ309B1 348 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 ANKRD55Q3KP44 614 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 ZNF876PQ49A33 203 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 TMEM128Q5BJH2 165 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 H2BFWTQ7Z2G1 175 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 LYZL2Q7Z4W2 148 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 TMED4Q7Z7H5 227 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 SGPP2Q8IWX5 399 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 UBE2E2Q96LR5 201 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 OR5B12Q96R08 314 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 PHB2Q99623 299 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 SPIN2AQ99865 258 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 SPIN2BQ9BPZ2 258 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 C7orf50Q9BRJ6 194 aaKnown RBP4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 ATG101Q9BSB4 218 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 ALX4Q9H161 411 aaPredicted RBP4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 GNB4Q9HAV0 340 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 NDUFA4L2Q9NRX3 87 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 ZNF355PQ9NSJ1 428 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 TMEM14BQ9NUH8 114 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 KCNIP3Q9Y2W7 256 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 OR51B2Q9Y5P1 312 aa4.71□□□□□ -1.66
RTFDC1-209ENST00000487211 TRBV9A0A0B4J1U6 114 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 C9orf170A2RU37 121 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 C15orf61A6NNL5 157 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 CREBL2O60519 120 aaPredicted RBP4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 SNAPC5O75971 98 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 SFT2D2O95562 160 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 IGHV3-11P01762 117 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 TRGV3P03979 118 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 OR4E1P0C645 316 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 TRAPPC2P0DI81 140 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 TRAPPC2BP0DI82 140 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 CTRB1P17538 263 aa4.7□□□□□ -1.66
RTFDC1-209ENST00000487211 PSMB6P28072 239 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms