RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 NEU4Q8WWR8 484 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-208ENST00000486641 A8MWL6 223 aa8.63□□□□□ -1.03
CCDC171-208ENST00000486641 NDUFS8O00217 210 aa8.63□□□□□ -1.03
CCDC171-208ENST00000486641 CD46P15529 392 aa8.63□□□□□ -1.03
CCDC171-208ENST00000486641 PLP1P60201 277 aa8.63□□□□□ -1.03
CCDC171-208ENST00000486641 SSBP2P81877 361 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-208ENST00000486641 VSTM2AQ8TAG5 236 aa8.63□□□□□ -1.03
CCDC171-208ENST00000486641 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
CCDC171-208ENST00000486641 PRSS22Q9GZN4 317 aa8.63□□□□□ -1.03
CCDC171-208ENST00000486641 PRSS47A8MTI9 375 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 MOSP00540 346 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 FAM87AP0C7U9 286 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 PATE2Q6UY27 113 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 KLF14Q8TD94 323 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-208ENST00000486641 FXYD5Q96DB9 178 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 ZNF747Q9BV97 191 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 HES7Q9BYE0 225 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 ABI3Q9P2A4 366 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 BOKQ9UMX3 212 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-208ENST00000486641 CHEK1O14757 476 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 AZU1P20160 251 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 PRDX2P32119 198 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 BMI1P35226 326 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 MYCNOSP40205 109 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 MAGEA5P43359 124 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 PRCDQ00LT1 54 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 MEF2CQ06413 473 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-208ENST00000486641 PPP1R32Q7Z5V6 425 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 SMRP1Q8NCR6 262 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 PERPQ96FX8 193 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 MLST8Q9BVC4 326 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 EPDR1Q9UM22 224 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 SOX21Q9Y651 276 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-208ENST00000486641 SPCS1Q9Y6A9 102 aa8.62□□□□□ -1.03
CCDC171-208ENST00000486641 TEX50A0A1B0GTY4 177 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 A0A1W2PPM0 123 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 MGST3O14880 152 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 AGFG2O95081 481 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 P01737 135 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 TCTAP57738 103 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 CD69Q07108 199 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 C2orf83Q53S99 150 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 PRSS57Q6UWY2 283 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 PIP4P2Q8N4L2 257 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 TMEM116Q8NCL8 245 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 OR10W1Q8NGF6 305 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 GPR82Q96P67 336 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 DUSP23Q9BVJ7 150 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 CXXC4Q9H2H0 198 aa8.61□□□□□ -1.03
CCDC171-208ENST00000486641 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.6□□□□□ -1.03
CCDC171-208ENST00000486641 C19orf71A6NCJ1 209 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 SRRM4A7MD48 611 aaKnown RBP8.6□□□□□ -1.03
CCDC171-208ENST00000486641 J3QW42 95 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 F2RL2O00254 374 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 COX7A2P2O60397 106 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 APOHP02749 345 aaPredicted RBP8.6□□□□□ -1.03
CCDC171-208ENST00000486641 SLC25A5P05141 298 aaKnown RBP8.6□□□□□ -1.03
CCDC171-208ENST00000486641 SAA2P0DJI9 122 aaPredicted RBP8.6□□□□□ -1.03
CCDC171-208ENST00000486641 SMIM17P0DL12 118 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 RNASE2P10153 161 aaKnown RBP8.6□□□□□ -1.03
CCDC171-208ENST00000486641 FABP6P51161 128 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 TMEM177Q53S58 311 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 CT45A1Q5HYN5 189 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 HES3Q5TGS1 186 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 C10orf113Q5VZT2 155 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 C16orf54Q6UWD8 224 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 RBPMS2Q6ZRY4 209 aaKnown RBP8.6□□□□□ -1.03
CCDC171-208ENST00000486641 OR5A1Q8NGJ0 315 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 CT45A3Q8NHU0 189 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 GUCD1Q96NT3 240 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 GTSF1LQ9H1H1 148 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 PRNDQ9UKY0 176 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 DNAJC13O75165 2243 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 TNCP24821 2201 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.6□□□□□ -1.03
CCDC171-208ENST00000486641 PGPA6NDG6 321 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 UPK2O00526 184 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 FSTL3O95633 263 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 PLAUP00749 431 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 RPL24P83731 157 aaKnown RBP8.6□□□□□ -1.03
CCDC171-208ENST00000486641 BOD1L2Q8IYS8 172 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 BLNKQ8WV28 456 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 ITLN1Q8WWA0 313 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 ZNF714Q96N38 554 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 PILRBQ9UKJ0 227 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 FZR1Q9UM11 496 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 KLF12Q9Y4X4 402 aa8.6□□□□□ -1.03
CCDC171-208ENST00000486641 PPIAL4EA0A075B759 164 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 PPIAL4CA0A0B4J2A2 164 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 TEX48A0A1B0GUV7 120 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 PPIAL4FP0DN26 164 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 CT83Q5H943 113 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 ADAMTSL5Q6ZMM2 481 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 ADTRPQ96IZ2 230 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 FAM173AQ9BQD7 235 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 ZNF257Q9Y2Q1 563 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 PCSK5Q92824 1860 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 IGKV1D-17A0A075B6S4 117 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 TMEM238LA0A1B0GVL6 79 aa8.59□□□□□ -1.03
CCDC171-208ENST00000486641 A1L4Q6 167 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms