RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 TIGITQ495A1 244 aa13.67□□□□□ -0.22
COL1A1-207ENST00000486572 LAMTOR1Q6IAA8 161 aa13.67□□□□□ -0.22
COL1A1-207ENST00000486572 OR4D5Q8NGN0 318 aa13.67□□□□□ -0.22
COL1A1-207ENST00000486572 OR1S2Q8NGQ3 325 aa13.67□□□□□ -0.22
COL1A1-207ENST00000486572 ACY3Q96HD9 319 aa13.67□□□□□ -0.22
COL1A1-207ENST00000486572 ASCL2Q99929 193 aa13.67□□□□□ -0.22
COL1A1-207ENST00000486572 SPAG8Q99932 426 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-207ENST00000486572 RHPN1-AS1Q9BWJ2 59 aa13.67□□□□□ -0.22
COL1A1-207ENST00000486572 C19orf73Q9NVV2 129 aa13.67□□□□□ -0.22
COL1A1-207ENST00000486572 COL7A1Q02388 2944 aa13.66□□□□□ -0.22
COL1A1-207ENST00000486572 WRBO00258 174 aa13.66□□□□□ -0.22
COL1A1-207ENST00000486572 CHEK1O14757 476 aa13.66□□□□□ -0.22
COL1A1-207ENST00000486572 TSPAN4O14817 238 aa13.66□□□□□ -0.22
COL1A1-207ENST00000486572 NKX2-1P43699 371 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-207ENST00000486572 RPP30P78346 268 aaKnown RBP13.66□□□□□ -0.22
COL1A1-207ENST00000486572 IFITM3Q01628 133 aa13.66□□□□□ -0.22
COL1A1-207ENST00000486572 IAH1Q2TAA2 248 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-207ENST00000486572 ENKURQ8TC29 256 aa13.66□□□□□ -0.22
COL1A1-207ENST00000486572 ZNF431Q8TF32 576 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-207ENST00000486572 NPIPB3Q92617 1050 aa13.66□□□□□ -0.22
COL1A1-207ENST00000486572 SEC22CQ9BRL7 303 aa13.66□□□□□ -0.22
COL1A1-207ENST00000486572 IGHV3-49A0A0A0MS15 119 aa13.65□□□□□ -0.22
COL1A1-207ENST00000486572 BMI1P35226 326 aa13.65□□□□□ -0.22
COL1A1-207ENST00000486572 GPX4P36969 197 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-207ENST00000486572 YPEL3P61236 119 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-207ENST00000486572 SBSPONQ8IVN8 264 aa13.65□□□□□ -0.22
COL1A1-207ENST00000486572 RNF2Q99496 336 aa13.65□□□□□ -0.22
COL1A1-207ENST00000486572 TUBA4BQ9H853 241 aa13.65□□□□□ -0.22
COL1A1-207ENST00000486572 PAIP2BQ9ULR5 123 aaKnown RBP13.65□□□□□ -0.22
COL1A1-207ENST00000486572 POLR2GP62487 172 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL1A1-207ENST00000486572 ZBTB8BQ8NAP8 495 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-207ENST00000486572 SLC35E1Q96K37 410 aa13.64□□□□□ -0.23
COL1A1-207ENST00000486572 IGHV3OR16-13A0A075B7E8 117 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 IGHV3-74A0A0B4J1X5 117 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 OR11H12B2RN74 326 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 H3BP45 60 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 SSSCA1O60232 199 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 SCGB1D2O95969 90 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 GAMTQ14353 236 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 SPANXN5Q5MJ07 72 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 C12orf45Q8N5I9 185 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-207ENST00000486572 Q8WTZ3 238 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 METTL26Q96S19 204 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 WFDC10AQ9H1F0 79 aa13.63□□□□□ -0.23
COL1A1-207ENST00000486572 STRAPQ9Y3F4 350 aaKnown RBP13.63□□□□□ -0.23
COL1A1-207ENST00000486572 OR4C46A6NHA9 309 aa13.62□□□□□ -0.23
COL1A1-207ENST00000486572 CCSO14618 274 aa13.62□□□□□ -0.23
COL1A1-207ENST00000486572 NPPCP23582 126 aa13.62□□□□□ -0.23
COL1A1-207ENST00000486572 DEFA1P59665 94 aa13.62□□□□□ -0.23
COL1A1-207ENST00000486572 DEFA3P59666 94 aa13.62□□□□□ -0.23
COL1A1-207ENST00000486572 DEFB125Q8N687 156 aa13.62□□□□□ -0.23
COL1A1-207ENST00000486572 ST8SIA2Q92186 375 aa13.62□□□□□ -0.23
COL1A1-207ENST00000486572 TMEM231Q9H6L2 316 aa13.62□□□□□ -0.23
COL1A1-207ENST00000486572 VSIRQ9H7M9 311 aa13.62□□□□□ -0.23
COL1A1-207ENST00000486572 GSKIPQ9P0R6 139 aa13.62□□□□□ -0.23
COL1A1-207ENST00000486572 PRSS46E5RG02 174 aa13.61□□□□□ -0.23
COL1A1-207ENST00000486572 TOMM40O96008 361 aa13.61□□□□□ -0.23
COL1A1-207ENST00000486572 APOHP02749 345 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-207ENST00000486572 IL5P05113 134 aa13.61□□□□□ -0.23
COL1A1-207ENST00000486572 CD5P06127 495 aa13.61□□□□□ -0.23
COL1A1-207ENST00000486572 CRYBB3P26998 211 aa13.61□□□□□ -0.23
COL1A1-207ENST00000486572 NRARPQ7Z6K4 114 aa13.61□□□□□ -0.23
COL1A1-207ENST00000486572 SRD5A3Q9H8P0 318 aa13.61□□□□□ -0.23
COL1A1-207ENST00000486572 PSENENQ9NZ42 101 aa13.61□□□□□ -0.23
COL1A1-207ENST00000486572 A0A1W2PS18 150 aa13.6□□□□□ -0.23
COL1A1-207ENST00000486572 ZFP92A6NM28 416 aa13.6□□□□□ -0.23
COL1A1-207ENST00000486572 FAM25EA8MYX2 175 aa13.6□□□□□ -0.23
COL1A1-207ENST00000486572 IL4P05112 153 aa13.6□□□□□ -0.23
COL1A1-207ENST00000486572 RD3LP0DJH9 198 aa13.6□□□□□ -0.23
COL1A1-207ENST00000486572 FAM90A2PQ658T7 463 aa13.6□□□□□ -0.23
COL1A1-207ENST00000486572 TCF24Q7RTU0 167 aa13.6□□□□□ -0.23
COL1A1-207ENST00000486572 NARS2Q96I59 477 aaKnown RBP13.6□□□□□ -0.23
COL1A1-207ENST00000486572 SMIM8Q96KF7 97 aa13.6□□□□□ -0.23
COL1A1-207ENST00000486572 RAB40CQ96S21 281 aa13.6□□□□□ -0.23
COL1A1-207ENST00000486572 U3KQK5 164 aa13.6□□□□□ -0.23
COL1A1-207ENST00000486572 IGHV3-66A0A0C4DH42 116 aa13.59□□□□□ -0.23
COL1A1-207ENST00000486572 C5orf51A6NDU8 294 aa13.59□□□□□ -0.23
COL1A1-207ENST00000486572 GPN1Q9HCN4 374 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-207ENST00000486572 RCL1Q9Y2P8 373 aaKnown RBP13.59□□□□□ -0.23
COL1A1-207ENST00000486572 IGKV3-7A0A075B6H7 116 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 IGKV1D-37A0A075B6S9 117 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 DFFBO76075 338 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 MBPP02686 304 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-207ENST00000486572 FABP1P07148 127 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 PSG1P11464 419 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 PAX9P55771 341 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 TAS2R30P59541 319 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 USF2Q15853 346 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-207ENST00000486572 LINC00322Q6ZN03 302 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-207ENST00000486572 LILRB2Q8N423 598 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 OR51G1Q8NGK1 321 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 GRAMD2BQ96HH9 432 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 TM2D3Q9BRN9 247 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 ZMAT4Q9H898 229 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 DNAH9Q9NYC9 4486 aa13.58□□□□□ -0.24
COL1A1-207ENST00000486572 PRAF2O60831 178 aa13.57□□□□□ -0.24
COL1A1-207ENST00000486572 TSC22D2O75157 780 aa13.57□□□□□ -0.24
COL1A1-207ENST00000486572 HNRNPCP07910 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL1A1-207ENST00000486572 P2RY1P47900 373 aa13.57□□□□□ -0.24
COL1A1-207ENST00000486572 TFPI2P48307 235 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms