RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 IFNA21P01568 189 aa10.09□□□□□ -0.79
SDCCAG3-211ENST00000486441 IFNA17P01571 189 aa10.09□□□□□ -0.79
SDCCAG3-211ENST00000486441 OPRK1P41145 380 aa10.09□□□□□ -0.79
SDCCAG3-211ENST00000486441 TSPAN5P62079 268 aa10.09□□□□□ -0.79
SDCCAG3-211ENST00000486441 DHODHQ02127 395 aa10.09□□□□□ -0.79
SDCCAG3-211ENST00000486441 C1orf134Q5TEV5 83 aa10.09□□□□□ -0.79
SDCCAG3-211ENST00000486441 SLC35G3Q8N808 338 aa10.09□□□□□ -0.79
SDCCAG3-211ENST00000486441 ZNF709Q8N972 641 aa10.09□□□□□ -0.79
SDCCAG3-211ENST00000486441 YTHDF1Q9BYJ9 559 aaKnown RBP10.09□□□□□ -0.79
SDCCAG3-211ENST00000486441 MYCBP2O75592 4640 aa10.08□□□□□ -0.8
SDCCAG3-211ENST00000486441 HNRNPCP07910 306 aaKnown RBP eCLIP10.08□□□□□ -0.8
SDCCAG3-211ENST00000486441 AP2S1P53680 142 aaPredicted RBP10.08□□□□□ -0.8
SDCCAG3-211ENST00000486441 SUB1P53999 127 aaKnown RBP eCLIP10.08□□□□□ -0.8
SDCCAG3-211ENST00000486441 EMP1P54849 157 aa10.08□□□□□ -0.8
SDCCAG3-211ENST00000486441 YPEL3P61236 119 aaPredicted RBP10.08□□□□□ -0.8
SDCCAG3-211ENST00000486441 FAM222AQ5U5X8 452 aa10.08□□□□□ -0.8
SDCCAG3-211ENST00000486441 GSG1LQ6UXU4 331 aa10.08□□□□□ -0.8
SDCCAG3-211ENST00000486441 NRN1Q9NPD7 142 aa10.08□□□□□ -0.8
SDCCAG3-211ENST00000486441 TRAV30A0A087WSZ9 112 aa10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 SMIM9A6NGZ8 99 aa10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 M0QYG6 137 aa10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 NKX2-1P43699 371 aaPredicted RBP10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 FXYD7P58549 80 aa10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 NUTF2P61970 127 aaKnown RBP10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 OXA1LQ15070 435 aa10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 SP6Q3SY56 376 aa10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 C1orf158Q8N1D5 194 aa10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 WDR12Q9GZL7 423 aaKnown RBP10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 VCX3BQ9H321 246 aa10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 DMBT1Q9UGM3 2413 aaPredicted RBP10.07□□□□□ -0.8
SDCCAG3-211ENST00000486441 TMEM189A5PLL7 270 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 S100GP29377 79 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 HOXA1P49639 335 aaPredicted RBP10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 RND2P52198 227 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 PIGPP57054 158 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 TMEM88Q6PEY1 159 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 CROCCP3Q8IVE0 287 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 UBE2DNLQ8IWF7 75 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 MAPKAPK5-AS1Q8N8E1 139 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 OR1S2Q8NGQ3 325 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 Q8WTZ3 238 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 CLUHP3Q96NS8 147 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 NIPSNAP3BQ9BS92 247 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 SCPEP1Q9HB40 452 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 RFNGQ9Y644 331 aa10.06□□□□□ -0.8
SDCCAG3-211ENST00000486441 C3orf85A0A1B0GTC6 90 aa10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 SOCS3O14543 225 aa10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 IGKV3-20P01619 116 aa10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 UCP1P25874 307 aa10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 OR10J1P30954 320 aa10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 SNRPD3P62318 126 aaKnown RBP10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 NEDD8Q15843 81 aa10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 C2orf83Q53S99 150 aa10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 SIGLEC15Q6ZMC9 328 aa10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 LHFPL5Q8TAF8 219 aa10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 ZNF486Q96H40 463 aaPredicted RBP10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 NARS2Q96I59 477 aaKnown RBP10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 SLC35B3Q9H1N7 401 aa10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 SAV1Q9H4B6 383 aaPredicted RBP10.05□□□□□ -0.8
SDCCAG3-211ENST00000486441 VPS13BQ7Z7G8 4022 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 IGHV3OR16-12A0A075B7B8 117 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 C16orf90A8MZG2 172 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 IL4P05112 153 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 EIF2B2P49770 351 aaKnown RBP10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 AKR1C2P52895 323 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 SPCS3P61009 180 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 ZNF79Q15937 498 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 SOHLH1Q5JUK2 328 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 SNX29P2Q8IUI4 249 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 Q8N1X5 172 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 OR52E5Q8NH55 327 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 YIPF6Q96EC8 236 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 C17orf77Q96MU5 243 aa10.04□□□□□ -0.8
SDCCAG3-211ENST00000486441 TOMM40O96008 361 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 APOA1P02647 267 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 PRM2P04554 102 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 PSG1P11464 419 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 PGAM2P15259 253 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 ELK1P19419 428 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 RCVRNP35243 200 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 HTR2BP41595 481 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 OR4D10Q8NGI6 311 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 GLYATL2Q8WU03 294 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 NPIPB3Q92617 1050 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 KLK11Q9UBX7 282 aa10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 YTHDF2Q9Y5A9 579 aaKnown RBP10.03□□□□□ -0.8
SDCCAG3-211ENST00000486441 F6UB75 175 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 CDS2O95674 445 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 CD3DP04234 171 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 RD3LP0DJH9 198 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 SLC25A4P12235 298 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 HTN3P15516 51 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 LSM3P62310 102 aaKnown RBP10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 FOXI2Q6ZQN5 318 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 OR51G1Q8NGK1 321 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 ZNRF2Q8NHG8 242 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 RNASEH2CQ8TDP1 164 aaKnown RBP10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 GPR146Q96CH1 333 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 PDCD10Q9BUL8 212 aa10.02□□□□□ -0.81
SDCCAG3-211ENST00000486441 COMMD3Q9UBI1 195 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms