RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 DEFA4P12838 97 aa11.53□□□□□ -0.56
POLR2J3-204ENST00000486319 RHOBP62745 196 aa11.53□□□□□ -0.56
POLR2J3-204ENST00000486319 BRD3OSQ6XYD6 125 aa11.53□□□□□ -0.56
POLR2J3-204ENST00000486319 BCL6BQ8N143 479 aaPredicted RBP11.53□□□□□ -0.56
POLR2J3-204ENST00000486319 SPATA3Q8NHX4 192 aa11.53□□□□□ -0.56
POLR2J3-204ENST00000486319 NPIPB3Q92617 1050 aa11.53□□□□□ -0.56
POLR2J3-204ENST00000486319 RARRES2Q99969 163 aa11.53□□□□□ -0.56
POLR2J3-204ENST00000486319 C19orf24Q9BVV8 132 aa11.53□□□□□ -0.56
POLR2J3-204ENST00000486319 WNT10AQ9GZT5 417 aa11.53□□□□□ -0.56
POLR2J3-204ENST00000486319 A0A0U1RQK1 487 aa11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 ZFP92A6NM28 416 aa11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 NPIPB5A8MRT5 1133 aa11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 LINC00869P0C866 280 aa11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 BCL2P10415 239 aa11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 TAGLN2P37802 199 aaKnown RBP11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 SELENOTP62341 195 aa11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 ICAM4Q14773 271 aa11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 GCSAMLQ5JQS6 135 aa11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 CYP2G1PQ6ZSU1 146 aa11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 SLC25A33Q9BSK2 321 aa11.52□□□□□ -0.57
POLR2J3-204ENST00000486319 TCRBV4S1A1TA0A5B7 111 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 HMGB3O15347 200 aaKnown RBP11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 MT-CO2P00403 227 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 FBP1P09467 338 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 PSMB3P49720 205 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 RND2P52198 227 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 BPIFB3P59826 476 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 SLC35E3Q7Z769 313 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 TTC9CQ8N5M4 171 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 SIGLECL1Q8N7X8 197 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 TMEM116Q8NCL8 245 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 FAM103A1Q9BTL3 118 aaKnown RBP11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 MANBALQ9NQG1 85 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 VAX2Q9UIW0 290 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 DNHD1Q96M86 4753 aa11.51□□□□□ -0.57
POLR2J3-204ENST00000486319 IGHV7-81A0A0B4J1V7 117 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 STAG3L2P0CL84 134 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 STAG3L3P0CL85 134 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 C19orf35Q6ZS72 473 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 C9orf139Q6ZV77 190 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 RXFP4Q8TDU9 374 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 RBM14Q96PK6 669 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 IGKV1D-37A0A075B6S9 117 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 I3L2K1 104 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 SNAPINO95295 136 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 CXorf1O96002 111 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 SRP19P09132 144 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 RNF2Q99496 336 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 TRGV9Q99603 122 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 MRPL36Q9P0J6 103 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 MOB4Q9Y3A3 225 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 DMRT1Q9Y5R6 373 aa11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 SOX21Q9Y651 276 aaPredicted RBP11.5□□□□□ -0.57
POLR2J3-204ENST00000486319 NDUFS6O75380 124 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 EIF3GO75821 320 aaKnown RBP eCLIP11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 IGHV3-48P01763 117 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 NDPQ00604 133 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 GUCA2BQ16661 112 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 SOHLH1Q5JUK2 328 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 ASPHD1Q5U4P2 390 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 FAM78BQ5VT40 261 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 GATAD1Q8WUU5 269 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 ZNF48Q96MX3 618 aaPredicted RBP11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 PFDN5Q99471 154 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 SSX3Q99909 188 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 ESM1Q9NQ30 184 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 TNFRSF19Q9NS68 423 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 THYN1Q9P016 225 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 FUT9Q9Y231 359 aa11.49□□□□□ -0.57
POLR2J3-204ENST00000486319 SCO1O75880 301 aa11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 OR5G3P0C626 314 aa11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 GATA2P23769 480 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 C5orf56Q8N8D9 126 aa11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 OR1L4Q8NGR5 311 aa11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 OR4X1Q8NH49 305 aa11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 SGMS2Q8NHU3 365 aa11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 PIFOQ8TCI5 191 aa11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 TMEM68Q96MH6 324 aa11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 MRPL32Q9BYC8 188 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 NKX6-2Q9C056 277 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 TMPRSS5Q9H3S3 457 aa11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 SEPSECSQ9HD40 501 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-204ENST00000486319 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
POLR2J3-204ENST00000486319 ARL14EPLP0DKL9 152 aa11.47□□□□□ -0.57
POLR2J3-204ENST00000486319 TAS2R45P59539 299 aa11.47□□□□□ -0.57
POLR2J3-204ENST00000486319 MEF2BQ02080 365 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-204ENST00000486319 DEFB112Q30KQ8 113 aa11.47□□□□□ -0.57
POLR2J3-204ENST00000486319 DUX5Q96PT3 197 aa11.47□□□□□ -0.57
POLR2J3-204ENST00000486319 HSPB9Q9BQS6 159 aa11.47□□□□□ -0.57
POLR2J3-204ENST00000486319 DNAJC4Q9NNZ3 241 aa11.47□□□□□ -0.57
POLR2J3-204ENST00000486319 PITPNC1Q9UKF7 332 aa11.47□□□□□ -0.57
POLR2J3-204ENST00000486319 IGHV3-21A0A0B4J1V1 117 aa11.46□□□□□ -0.57
POLR2J3-204ENST00000486319 MDFIC2A0A1B0GVS7 189 aa11.46□□□□□ -0.57
POLR2J3-204ENST00000486319 K7EIM0 57 aa11.46□□□□□ -0.57
POLR2J3-204ENST00000486319 EGR2P11161 476 aaPredicted RBP11.46□□□□□ -0.57
POLR2J3-204ENST00000486319 ZNF90Q03938 601 aa11.46□□□□□ -0.57
POLR2J3-204ENST00000486319 ATRAIDQ6UW56 229 aa11.46□□□□□ -0.57
POLR2J3-204ENST00000486319 FAM110DQ8TAY7 271 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms