RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 RPP25LQ8N5L8 163 aaKnown RBP11.25□□□□□ -0.61
COL9A1-207ENST00000486080 OR10G4Q8NGN3 311 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 OR10G9Q8NGN4 311 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 OR10G7Q8NGN6 311 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 PRSS22Q9GZN4 317 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 HRH4Q9H3N8 390 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 TEP1Q99973 2627 aaKnown RBP11.25□□□□□ -0.61
COL9A1-207ENST00000486080 TCRBV4S1A1TA0A5B7 111 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 INAFM1C9JVW0 142 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 F8W735 103 aaPredicted RBP11.25□□□□□ -0.61
COL9A1-207ENST00000486080 IGLC1P0CG04 106 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 NDUFA5Q16718 116 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 RCC1LQ96I51 464 aaKnown RBP11.25□□□□□ -0.61
COL9A1-207ENST00000486080 FAM181BA6NEQ2 426 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 CLN5O75503 358 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 TSPAN9O75954 239 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 M6PRP20645 277 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 CFHR3Q02985 330 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 ACOT6Q3I5F7 207 aaPredicted RBP11.24□□□□□ -0.61
COL9A1-207ENST00000486080 TIGITQ495A1 244 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 DPPA3Q6W0C5 159 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 ZNF329Q86UD4 541 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 COMMD7Q86VX2 200 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 TRGV9Q99603 122 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 KCNIP2Q9NS61 270 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 C21orf62Q9NYP8 219 aa11.24□□□□□ -0.61
COL9A1-207ENST00000486080 IGKV1-17P01599 117 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 MBP02144 154 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 TRGV3P03979 118 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 H2AFB1P0C5Y9 115 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 MFAP4P55083 255 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 SCGB2A2Q13296 93 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 FAM122CQ6P4D5 195 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 C10orf99Q6UWK7 81 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 LCNL1Q6ZST4 164 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 VN1R17PQ8TDU5 208 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 KLK15Q9H2R5 256 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 SLC25A22Q9H936 323 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 HMGB3O15347 200 aaKnown RBP11.23□□□□□ -0.61
COL9A1-207ENST00000486080 IGLV1-40P01703 118 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 CCL20P78556 96 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 Q56UQ5 140 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 SPSB3Q6PJ21 355 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 LCN15Q6UWW0 184 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 LYPD6BQ8NI32 183 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 ZNF502Q8TBZ5 544 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 SFT2D1Q8WV19 159 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 ZNF580Q9UK33 172 aa11.23□□□□□ -0.61
COL9A1-207ENST00000486080 FN1P02751 2386 aaKnown RBP11.22□□□□□ -0.61
COL9A1-207ENST00000486080 OR2T8A6NH00 312 aa11.22□□□□□ -0.61
COL9A1-207ENST00000486080 GNG7O60262 68 aa11.22□□□□□ -0.61
COL9A1-207ENST00000486080 PF4V1P10720 104 aa11.22□□□□□ -0.61
COL9A1-207ENST00000486080 NPBWR1P48145 328 aa11.22□□□□□ -0.61
COL9A1-207ENST00000486080 TPPP2P59282 170 aa11.22□□□□□ -0.61
COL9A1-207ENST00000486080 PFDN2Q9UHV9 154 aa11.22□□□□□ -0.61
COL9A1-207ENST00000486080 ATP6V1G1O75348 118 aa11.21□□□□□ -0.61
COL9A1-207ENST00000486080 FGF8P55075 233 aaPredicted RBP11.21□□□□□ -0.61
COL9A1-207ENST00000486080 SELENOTP62341 195 aa11.21□□□□□ -0.61
COL9A1-207ENST00000486080 ATP5G2Q06055 141 aa11.21□□□□□ -0.61
COL9A1-207ENST00000486080 SPATA31B1PQ5VZV4 182 aa11.21□□□□□ -0.61
COL9A1-207ENST00000486080 Q8N2B8 174 aa11.21□□□□□ -0.61
COL9A1-207ENST00000486080 RAB24Q969Q5 203 aa11.21□□□□□ -0.61
COL9A1-207ENST00000486080 CCDC140Q96MF4 163 aa11.21□□□□□ -0.61
COL9A1-207ENST00000486080 ACTR3CQ9C0K3 210 aaPredicted RBP11.21□□□□□ -0.61
COL9A1-207ENST00000486080 MED9Q9NWA0 146 aa11.21□□□□□ -0.61
COL9A1-207ENST00000486080 DOK5Q9P104 306 aa11.21□□□□□ -0.61
COL9A1-207ENST00000486080 PSMB11A5LHX3 300 aa11.21□□□□□ -0.62
COL9A1-207ENST00000486080 CLDN34H7C241 214 aa11.21□□□□□ -0.62
COL9A1-207ENST00000486080 PSG1P11464 419 aa11.21□□□□□ -0.62
COL9A1-207ENST00000486080 ZNF418Q8TF45 676 aaPredicted RBP11.21□□□□□ -0.62
COL9A1-207ENST00000486080 MBD3L1Q8WWY6 194 aa11.21□□□□□ -0.62
COL9A1-207ENST00000486080 TMEM37Q8WXS4 190 aa11.21□□□□□ -0.62
COL9A1-207ENST00000486080 CITED4Q96RK1 184 aa11.21□□□□□ -0.62
COL9A1-207ENST00000486080 CHRDL1Q9BU40 450 aa11.21□□□□□ -0.62
COL9A1-207ENST00000486080 SEPSECSQ9HD40 501 aaKnown RBP11.21□□□□□ -0.62
COL9A1-207ENST00000486080 CTXND1A0A1B0GTU2 59 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 MAP1LC3B2A6NCE7 125 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 FAM223BA6NKX1 122 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 SEC14L6B5MCN3 397 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 H3BUA1 57 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 BRI3O95415 125 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 IGHG4P01861 327 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 CLEC3BP05452 202 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 CTSGP08311 255 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 FCGR2BP31994 310 aaPredicted RBP11.2□□□□□ -0.62
COL9A1-207ENST00000486080 GPR183P32249 361 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 CDC34P49427 236 aaPredicted RBP11.2□□□□□ -0.62
COL9A1-207ENST00000486080 PATE2Q6UY27 113 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 Q6ZSV7 163 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 FAM223AQ8IWN6 122 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 MARC2Q969Z3 335 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 EEF1AKMT3Q96AZ1 226 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 TXN2Q99757 166 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 MAP1LC3BQ9GZQ8 125 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 SERTAD4Q9NUC0 356 aa11.2□□□□□ -0.62
COL9A1-207ENST00000486080 A0A1W2PPV4 95 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 RNASE1P07998 156 aaKnown RBP11.19□□□□□ -0.62
COL9A1-207ENST00000486080 RD3LP0DJH9 198 aa11.19□□□□□ -0.62
COL9A1-207ENST00000486080 ADMP35318 185 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms