RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 TRAV12-3A0A0B4J271 114 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 GGTLC3B5MD39 225 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 GNG5P63218 68 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 CACNA1IQ9P0X4 2223 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 A0A1B0GTI1 187 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 M0R1W7 72 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 RPUSD1Q9UJJ7 312 aaKnown RBP8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 SRCAPQ6ZRS2 3230 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 CKAP5Q14008 2032 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 TMEM178BH3BS89 294 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 EREGO14944 169 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 EFNB1P98172 346 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 NRN1Q9NPD7 142 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 ZNFX1Q9P2E3 1918 aaKnown RBP8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 E9PQ18 207 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 IGHV1-8P0DP01 117 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 PPIFP30405 207 aaKnown RBP8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 ACTL10Q5JWF8 245 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 HEPN1Q6WQI6 88 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 ZNF525Q8N782 197 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 MBNL3Q9NUK0 354 aaKnown RBP8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 KIF13BQ9NQT8 1826 aa8.76□□□□□ -1.01
SRGAP3-207ENST00000485983 TRBV7-1A0A0A6YYK4 115 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 NDUFS8O00217 210 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 NAPSAO96009 420 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 RIPPLY3P57055 190 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 KLRD1Q13241 179 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 CCL20P78556 96 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 OR5A1Q8NGJ0 315 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 COQ2Q96H96 371 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 A0A1W2PRE2 83 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 FAM90A9PA6NNJ1 464 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 INSP01308 110 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 DUTP33316 252 aaKnown RBP8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 ACACAQ13085 2346 aa8.75□□□□□ -1.01
SRGAP3-207ENST00000485983 A0A0G2JNJ9 132 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 SRRM5B3KS81 715 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 HBDP02042 147 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 FBLIM1Q8WUP2 373 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 Q9UFV3 132 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 IGHV1-3A0A0C4DH29 117 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 A0A0U1RRA0 63 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 GATA3P23771 443 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 TMEM200BQ69YZ2 307 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 LINC00114Q6XXX2 140 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 TMEM190Q8WZ59 177 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 RIF1Q5UIP0 2472 aaKnown RBP8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 RNF223E7ERA6 249 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 SNAI2O43623 268 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 PSPNO60542 156 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 TFF1P04155 84 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 LINC00614P0C842 121 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 TRAV2A0A0B4J234 112 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 MLNRO43193 412 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 IGHV3-53P01767 116 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 HAPLN4Q86UW8 402 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 DPM2O94777 84 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 PYYP10082 97 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 ZNF876PQ49A33 203 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 C9orf139Q6ZV77 190 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 UBE2E2Q96LR5 201 aa8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 RTBDNQ9BSG5 229 aaPredicted RBP8.74□□□□□ -1.01
SRGAP3-207ENST00000485983 TNFSF13O75888 250 aa8.73□□□□□ -1.01
SRGAP3-207ENST00000485983 SEC11AP67812 179 aa8.73□□□□□ -1.01
SRGAP3-207ENST00000485983 Q5PR19 223 aa8.73□□□□□ -1.01
SRGAP3-207ENST00000485983 IMMP2LQ96T52 175 aa8.73□□□□□ -1.01
SRGAP3-207ENST00000485983 ZNF98A6NK75 572 aa8.73□□□□□ -1.01
SRGAP3-207ENST00000485983 PAX4O43316 350 aa8.73□□□□□ -1.01
SRGAP3-207ENST00000485983 CHTOPQ9Y3Y2 248 aaKnown RBP8.73□□□□□ -1.01
SRGAP3-207ENST00000485983 ZNF329Q86UD4 541 aa8.73□□□□□ -1.01
SRGAP3-207ENST00000485983 SELENOKQ9Y6D0 94 aa8.73□□□□□ -1.01
SRGAP3-207ENST00000485983 SRRM4A7MD48 611 aaKnown RBP8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 LDLRAD4O15165 306 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 C5orf64Q2M2E5 130 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 C6orf226Q5I0X4 101 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 NPIPB5A8MRT5 1133 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 DDTP30046 118 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 NR2C2APQ86WQ0 139 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 SLC25A2Q9BXI2 301 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 BPESC1Q9GZL8 116 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 IGKV1D-13A0A0B4J2D9 117 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 RAMP3O60896 148 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 IGHV4-39P01824 125 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 IGKV1-13P0DP09 117 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 IFITM3Q01628 133 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 Q6ZS92 163 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 C14orf144Q96I85 54 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 POLEQ07864 2286 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 IGHV3-73A0A0B4J1V6 119 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 FAM223BA6NKX1 122 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 FAM223AQ8IWN6 122 aa8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 SPAG8Q99932 426 aaPredicted RBP8.72□□□□□ -1.01
SRGAP3-207ENST00000485983 A0A1B0GWJ7 208 aa8.71□□□□□ -1.01
SRGAP3-207ENST00000485983 FCN3O75636 299 aa8.71□□□□□ -1.01
SRGAP3-207ENST00000485983 TOMM40O96008 361 aa8.71□□□□□ -1.01
SRGAP3-207ENST00000485983 DEFB130BP0DP73 79 aa8.71□□□□□ -1.01
SRGAP3-207ENST00000485983 DEFB130AP0DP74 79 aa8.71□□□□□ -1.01
SRGAP3-207ENST00000485983 RPL15P61313 204 aaKnown RBP8.71□□□□□ -1.01
SRGAP3-207ENST00000485983 SRSF6Q13247 344 aaKnown RBP8.71□□□□□ -1.01
SRGAP3-207ENST00000485983 RASL10AQ92737 203 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms