RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SPACA5Q96QH8 159 aa3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 S100A13Q99584 98 aa3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 TM2D2Q9BX73 214 aa3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 SAMD10Q9BYL1 202 aa3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 DEFB126Q9BYW3 111 aa3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 OR2J1Q9GZK6 312 aa3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 MRPL27Q9P0M9 148 aaKnown RBP3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 NAT8Q9UHE5 227 aa3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 RARRES3Q9UL19 164 aa3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 U3KQA8 63 aa3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 NCOA6Q14686 2063 aaPredicted RBP3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 MYO9BQ13459 2157 aa3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 PHF3Q92576 2039 aaKnown RBP3.21□□□□□ -1.9
PRPF38B-205ENST00000485810 SPAG17Q6Q759 2223 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 CACNA1EQ15878 2313 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 IGHV1-45A0A0A0MS14 117 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 TRBV6-6A0A0A6YYG2 114 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 TRAV1-1A0A0B4J248 108 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 IGHV5-10-1A0A0J9YXX1 117 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 FAM236DA0A1B0GTK5 79 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 C5orf63A6NC05 138 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 C9JQL5 133 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 SDCBPO00560 298 aaPredicted RBP3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 PDCD6O75340 191 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 PITX3O75364 302 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 FAM106CPP0CH98 169 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF728P0DKX0 622 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 FAM236CP0DP71 79 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 SLC25A6P12236 298 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 RPL7P18124 248 aaKnown RBP3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 CNTFRP26992 372 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 AKR1C2P52895 323 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 B3GALT5-AS1P59052 145 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 S100A10P60903 97 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 PSG9Q00887 426 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 AKR1C1Q04828 323 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 PRDX4Q13162 271 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF266Q14584 549 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF726P1Q15940 193 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 ECSCRQ19T08 205 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 TMEM241Q24JQ0 296 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 FAM106AQ4KMX7 169 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 RUSC1-AS1Q66K80 236 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 PVRIGQ6DKI7 326 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 DPPA3Q6W0C5 159 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 FBXW12Q6X9E4 464 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 C6orf201Q7Z4U5 140 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 SAXO1Q8IYX7 474 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 CT55Q8WUE5 264 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 RTN4IP1Q8WWV3 396 aaPredicted RBP3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 GPR146Q96CH1 333 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 FMC1Q96HJ9 113 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 YPEL4Q96NS1 127 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 SPIN2AQ99865 258 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 SPIN2BQ9BPZ2 258 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 ADAT1Q9BUB4 502 aaKnown RBP3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 OR2H1Q9GZK4 316 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 SLC35B3Q9H1N7 401 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 LIME1Q9H400 295 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF286AQ9HBT8 521 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 PROK2Q9HC23 129 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 TMEM9BQ9NQ34 198 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 AK3Q9UIJ7 227 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF580Q9UK33 172 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 UNC13CQ8NB66 2214 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 CABIN1Q9Y6J0 2220 aa3.2□□□□□ -1.9
PRPF38B-205ENST00000485810 IGKV1-27A0A075B6S5 117 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 A0A087WWC5 75 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 TRAV8-2A0A0B4J237 113 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 IGKV1-12A0A0C4DH73 117 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 SNURFLB1AK76 121 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 C9JAW5 83 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 RPL36A-HNRNPH2H7BZ11 118 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 SPRY3O43610 288 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 SS18L1O75177 396 aaPredicted RBP3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 NAPSAO96009 420 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 IGKV1D-12P01611 117 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 AMBPP02760 352 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 MMP7P09237 267 aaPredicted RBP3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 LGALS1P09382 135 aaKnown RBP3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 SCTP09683 121 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 OR5AC1P0C628 307 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 IGHV4-31P0DP07 118 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 COX6A1P12074 109 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 NTF3P20783 257 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 NFYBP25208 207 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 BRS3P32247 399 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 PFN2P35080 140 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 PCBD1P61457 104 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 FABP9Q0Z7S8 132 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 MIDNQ504T8 468 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 NMSQ5H8A3 153 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 FAM201AQ5SY85 155 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 ZNF880Q6PDB4 577 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 SHISA6Q6ZSJ9 500 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 LINC00596Q86U02 117 aa3.19□□□□□ -1.9
PRPF38B-205ENST00000485810 FBXL14Q8N1E6 418 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms