RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 GPR146Q96CH1 333 aa-0.33□□□□□ -2.46
SFPQ-209ENST00000485454 MED29Q9NX70 200 aa-0.33□□□□□ -2.46
SFPQ-209ENST00000485454 TNFSF18Q9UNG2 199 aa-0.33□□□□□ -2.46
SFPQ-209ENST00000485454 ERGIC3Q9Y282 383 aa-0.33□□□□□ -2.46
SFPQ-209ENST00000485454 OTOGQ6ZRI0 2925 aa-0.33□□□□□ -2.46
SFPQ-209ENST00000485454 PIEZO1Q92508 2521 aa-0.33□□□□□ -2.46
SFPQ-209ENST00000485454 PIK3R4Q99570 1358 aa-0.33□□□□□ -2.46
SFPQ-209ENST00000485454 PHRF1Q9P1Y6 1649 aaKnown RBP-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 IGHV1-58A0A0C4DH39 117 aa-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 QRFPP83859 136 aa-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 MLLT11Q13015 90 aaPredicted RBP-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 HAGHLQ6PII5 290 aaPredicted RBP-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 PLEKHG7Q6ZR37 379 aa-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 OR13D1Q8NGV5 346 aa-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 PIGXQ8TBF5 258 aa-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 H1FXQ92522 213 aaKnown RBP-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 PSMF1Q92530 271 aa-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 TEP1Q99973 2627 aaKnown RBP-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 IMP3Q9NV31 184 aaKnown RBP-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 EPDR1Q9UM22 224 aa-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 ABCA12Q86UK0 2595 aa-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 MYH10P35580 1976 aa-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 UNC13CQ8NB66 2214 aa-0.34□□□□□ -2.46
SFPQ-209ENST00000485454 FLNCQ14315 2725 aa-0.35□□□□□ -2.46
SFPQ-209ENST00000485454 MYO3BQ8WXR4 1341 aa-0.35□□□□□ -2.46
SFPQ-209ENST00000485454 PLXNA4Q9HCM2 1894 aa-0.35□□□□□ -2.46
SFPQ-209ENST00000485454 SPTBP11277 2137 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 KDM6AO15550 1401 aaPredicted RBP-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 CXCR6O00574 342 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 SPINK1P00995 79 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 IFNA10P01566 189 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 SPINT3P49223 89 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 BLVRAP53004 296 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 UBE2G2P60604 165 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 MED21Q13503 144 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 LRRN1Q6UXK5 716 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 C14orf105Q9NVL8 296 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 FBXL12Q9NXK8 326 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 ORMDL1Q9P0S3 153 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 FREM3P0C091 2139 aa-0.35□□□□□ -2.47
SFPQ-209ENST00000485454 TNS3Q68CZ2 1445 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 FANCMQ8IYD8 2048 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 UNC79Q9P2D8 2635 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 BUB1B-PAK6H3BSN5 160 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 CALUO43852 315 aaPredicted RBP-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 APOEP02649 317 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 RAB5BP61020 215 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 PMAIP1Q13794 54 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 CDKL4Q5MAI5 379 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 LPCAT3Q6P1A2 487 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 SFXN4Q6P4A7 337 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 C10orf99Q6UWK7 81 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 ZGRF1Q86YA3 2104 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 LINC00301Q8NCQ3 95 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 TOMM6Q96B49 74 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 ZC2HC1AQ96GY0 325 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 OR51V1Q9H2C8 321 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 C14orf132Q9NPU4 83 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 RNF11Q9Y3C5 154 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 V9GYY5 206 aaPredicted RBP-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 RYR3Q15413 4870 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 PLXND1Q9Y4D7 1925 aa-0.36□□□□□ -2.47
SFPQ-209ENST00000485454 ABCA2Q9BZC7 2435 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 C7orf71A4D174 169 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 DPRXA6NFQ7 191 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 ZNF682O95780 498 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 COX5BP10606 129 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 RPS12P25398 132 aaKnown RBP-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 CDC42P60953 191 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 C2orf82Q6UX34 121 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 LYSMD1Q96S90 227 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 NIPSNAP1Q9BPW8 284 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 OR51I1Q9H343 314 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 C11orf68Q9H3H3 251 aaKnown RBP-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 OSTCQ9NRP0 149 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 CMTM6Q9NX76 183 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 MYH7BA7E2Y1 1941 aa-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 SONP18583 2426 aaKnown RBP-0.37□□□□□ -2.47
SFPQ-209ENST00000485454 SIP14410 1827 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 TRAV9-1A0A075B6T8 112 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 TRBV30A0A0K0K1B3 111 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 C5orf67F2Z3F1 127 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 DHFRP00374 187 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 HLA-DRB1P01911 266 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 CCL4P13236 92 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 ESRGQ1W209 222 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 LINC01554Q52M75 96 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 BRMS1LQ5PSV4 323 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 ALKAL1Q6UXT8 129 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 TRAPPC6BQ86SZ2 158 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 ST6GALNAC3Q8NDV1 305 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 OR51D1Q8NGF3 324 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 TMEM254Q8TBM7 123 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 RAB8BQ92930 207 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 C6orf62Q9GZU0 229 aaPredicted RBP-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 PRTFDC1Q9NRG1 225 aa-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 SETD2Q9BYW2 2564 aaPredicted RBP-0.38□□□□□ -2.47
SFPQ-209ENST00000485454 CACNA1HO95180 2353 aa-0.39□□□□□ -2.47
SFPQ-209ENST00000485454 TCRBV4S1A1TA0A5B7 111 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms