RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 CCR2P41597 374 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 CSN1S1P47710 185 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 GNG5P63218 68 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 AKR1C8PQ5T2L2 129 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 PHF13Q86YI8 300 aaPredicted RBP1.93□□□□□ -2.1
SRRM1-213ENST00000485441 OR13C4Q8NGS5 318 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 OR8D2Q9GZM6 311 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 SH3BGRL3Q9H299 93 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 LYRM2Q9NU23 88 aaPredicted RBP1.93□□□□□ -2.1
SRRM1-213ENST00000485441 TP73-AS1Q9UF72 201 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 FUT9Q9Y231 359 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 NDUFAF1Q9Y375 327 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 TONSLQ96HA7 1378 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 ECM29Q5VYK3 1845 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 POLA1P09884 1462 aaPredicted RBP1.93□□□□□ -2.1
SRRM1-213ENST00000485441 THOC2Q8NI27 1593 aaKnown RBP1.93□□□□□ -2.1
SRRM1-213ENST00000485441 BICRAQ9NZM4 1560 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 CTTNBP2Q8WZ74 1663 aa1.93□□□□□ -2.1
SRRM1-213ENST00000485441 YTHDC2Q9H6S0 1430 aaKnown RBP1.92□□□□□ -2.1
SRRM1-213ENST00000485441 DENND4CQ5VZ89 1909 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 TRAV7A0A075B6U4 112 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 TRAV4A0A0B4J268 109 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 SIGLEC16A6NMB1 481 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 LINC00587B1AMM8 73 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 G3V2T6 193 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 J3QQQ9 107 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 LEPROTO15243 131 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 IGKV1-16P04430 117 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 PRM2P04554 102 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 CRHP06850 196 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 NBEAP1P0C6P0 100 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 SMIM17P0DL12 118 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 HIST1H2BOP23527 126 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 HIST1H2BBP33778 126 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 RPL28P46779 137 aaKnown RBP1.92□□□□□ -2.1
SRRM1-213ENST00000485441 HIST1H2BDP58876 126 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 DEFA3P59666 94 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 RPL26P61254 145 aaKnown RBP1.92□□□□□ -2.1
SRRM1-213ENST00000485441 NCALDP61601 193 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 GNG11P61952 73 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 RHOBP62745 196 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 HIST1H2BCP62807 126 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 AKR1C1Q04828 323 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 HIST2H2BEQ16778 126 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 BRMS1LQ5PSV4 323 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.92□□□□□ -2.1
SRRM1-213ENST00000485441 RPL22L1Q6P5R6 122 aaKnown RBP1.92□□□□□ -2.1
SRRM1-213ENST00000485441 Q6Q795 121 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 Q6ZRN7 208 aaPredicted RBP1.92□□□□□ -2.1
SRRM1-213ENST00000485441 OR10K1Q8NGX5 313 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 SLC25A40Q8TBP6 338 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 HIST1H2BHQ93079 126 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 HIST1H2BNQ99877 126 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 HIST1H2BMQ99879 126 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 C6orf62Q9GZU0 229 aaPredicted RBP1.92□□□□□ -2.1
SRRM1-213ENST00000485441 MED29Q9NX70 200 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 TVP23BQ9NYZ1 205 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 IL36BQ9NZH7 164 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 RPL26L1Q9UNX3 145 aaKnown RBP1.92□□□□□ -2.1
SRRM1-213ENST00000485441 RFX7Q2KHR2 1363 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 IFT140Q96RY7 1462 aa1.92□□□□□ -2.1
SRRM1-213ENST00000485441 CPSF1Q10570 1443 aaKnown RBP1.91□□□□□ -2.1
SRRM1-213ENST00000485441 TOP2AP11388 1531 aaKnown RBP1.91□□□□□ -2.1
SRRM1-213ENST00000485441 PRDM15P57071 1507 aaPredicted RBP1.91□□□□□ -2.1
SRRM1-213ENST00000485441 RTTNQ86VV8 2226 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 RB1CC1Q8TDY2 1594 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 TCOF1Q13428 1488 aaKnown RBP1.91□□□□□ -2.1
SRRM1-213ENST00000485441 PLEKHH2Q8IVE3 1493 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 TRBV19A0A075B6N1 114 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 F8W036 122 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 H7C1C5 153 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 SLC22A1O15245 554 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 NDUFC2O95298 119 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 IFNA10P01566 189 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 DEFA4P12838 97 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 PSMB8P28062 276 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 ATP5G3P48201 142 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 LCN6P62502 163 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 ERHP84090 104 aaKnown RBP1.91□□□□□ -2.1
SRRM1-213ENST00000485441 AADACL3Q5VUY0 350 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 ZNF439Q8NDP4 499 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 H1FXQ92522 213 aaKnown RBP1.91□□□□□ -2.1
SRRM1-213ENST00000485441 BORCS5Q969J3 196 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 C2orf50Q96LR7 162 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 GPER1Q99527 375 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 DERL1Q9BUN8 251 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 ACER3Q9NUN7 267 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 SSR3Q9UNL2 185 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 ZCCHC11Q5TAX3 1644 aaKnown RBP1.91□□□□□ -2.1
SRRM1-213ENST00000485441 LMTK2Q8IWU2 1503 aa1.91□□□□□ -2.1
SRRM1-213ENST00000485441 STRCQ7RTU9 1775 aa1.9□□□□□ -2.1
SRRM1-213ENST00000485441 CAMSAP2Q08AD1 1489 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 FYCO1Q9BQS8 1478 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 CHD8Q9HCK8 2581 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 CCDC160A6NGH7 325 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 CLDN25C9JDP6 229 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 H3BT86 120 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 AIPO00170 330 aa1.9□□□□□ -2.11
SRRM1-213ENST00000485441 KPNA4O00629 521 aaPredicted RBP1.9□□□□□ -2.11
SRRM1-213ENST00000485441 PGLYRP1O75594 196 aaPredicted RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms