RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 GINS3Q9BRX5 216 aa13.4□□□□□ -0.26
SREBF1-213ENST00000485080 C20orf24Q9BUV8 137 aa13.4□□□□□ -0.26
SREBF1-213ENST00000485080 ZFAND3Q9H8U3 227 aa13.4□□□□□ -0.26
SREBF1-213ENST00000485080 GPN1Q9HCN4 374 aaPredicted RBP13.4□□□□□ -0.26
SREBF1-213ENST00000485080 SMPXQ9UHP9 88 aa13.4□□□□□ -0.26
SREBF1-213ENST00000485080 SMAD5-AS1Q9Y6J3 95 aa13.4□□□□□ -0.26
SREBF1-213ENST00000485080 A8MZ25 164 aa13.39□□□□□ -0.27
SREBF1-213ENST00000485080 INMT-MINDY4F8WBC2 141 aa13.39□□□□□ -0.27
SREBF1-213ENST00000485080 YIF1AO95070 293 aa13.39□□□□□ -0.27
SREBF1-213ENST00000485080 TAS2R30P59541 319 aa13.39□□□□□ -0.27
SREBF1-213ENST00000485080 TMEM61Q8N0U2 210 aa13.39□□□□□ -0.27
SREBF1-213ENST00000485080 RAB40CQ96S21 281 aa13.39□□□□□ -0.27
SREBF1-213ENST00000485080 PUS1Q9Y606 427 aaKnown RBP eCLIP13.39□□□□□ -0.27
SREBF1-213ENST00000485080 TRAV14DV4A0A0A6YYC5 116 aa13.38□□□□□ -0.27
SREBF1-213ENST00000485080 IGHV7-4-1A0A0J9YVY3 117 aa13.38□□□□□ -0.27
SREBF1-213ENST00000485080 PRSS46E5RG02 174 aa13.38□□□□□ -0.27
SREBF1-213ENST00000485080 OR10J1P30954 320 aa13.38□□□□□ -0.27
SREBF1-213ENST00000485080 GAMTQ14353 236 aa13.38□□□□□ -0.27
SREBF1-213ENST00000485080 BTNL8Q6UX41 500 aa13.38□□□□□ -0.27
SREBF1-213ENST00000485080 NPIPB3Q92617 1050 aa13.38□□□□□ -0.27
SREBF1-213ENST00000485080 STRAPQ9Y3F4 350 aaKnown RBP13.38□□□□□ -0.27
SREBF1-213ENST00000485080 HUWE1Q7Z6Z7 4374 aaKnown RBP13.37□□□□□ -0.27
SREBF1-213ENST00000485080 SCAF4O95104 1147 aaKnown RBP13.37□□□□□ -0.27
SREBF1-213ENST00000485080 PAX9P55771 341 aa13.37□□□□□ -0.27
SREBF1-213ENST00000485080 IL15RAQ13261 267 aa13.37□□□□□ -0.27
SREBF1-213ENST00000485080 TIGITQ495A1 244 aa13.37□□□□□ -0.27
SREBF1-213ENST00000485080 GTSCR1Q86UQ5 136 aa13.37□□□□□ -0.27
SREBF1-213ENST00000485080 SLC35E1Q96K37 410 aa13.37□□□□□ -0.27
SREBF1-213ENST00000485080 C2orf50Q96LR7 162 aa13.37□□□□□ -0.27
SREBF1-213ENST00000485080 VSIRQ9H7M9 311 aa13.37□□□□□ -0.27
SREBF1-213ENST00000485080 GSKIPQ9P0R6 139 aa13.37□□□□□ -0.27
SREBF1-213ENST00000485080 RCL1Q9Y2P8 373 aaKnown RBP13.37□□□□□ -0.27
SREBF1-213ENST00000485080 IGHV3OR16-8A0A075B7F1 116 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 CHEK1O14757 476 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 TSPAN4O14817 238 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 SSSCA1O60232 199 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 TSC22D2O75157 780 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 MBPP02686 304 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-213ENST00000485080 CD5P06127 495 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 BMI1P35226 326 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 SPANXN5Q5MJ07 72 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 LAMTOR1Q6IAA8 161 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 TMEM14EPQ6UXP3 125 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 WDR89Q96FK6 387 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-213ENST00000485080 ACY3Q96HD9 319 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 RHPN1-AS1Q9BWJ2 59 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 STAB2Q8WWQ8 2551 aa13.36□□□□□ -0.27
SREBF1-213ENST00000485080 CCSO14618 274 aa13.35□□□□□ -0.27
SREBF1-213ENST00000485080 ZNF207O43670 478 aaKnown RBP13.35□□□□□ -0.27
SREBF1-213ENST00000485080 TOMM40O96008 361 aa13.35□□□□□ -0.27
SREBF1-213ENST00000485080 CRYBB3P26998 211 aa13.35□□□□□ -0.27
SREBF1-213ENST00000485080 RBPMS2Q6ZRY4 209 aaKnown RBP13.35□□□□□ -0.27
SREBF1-213ENST00000485080 THAP8Q8NA92 274 aa13.35□□□□□ -0.27
SREBF1-213ENST00000485080 Q8WTZ3 238 aa13.35□□□□□ -0.27
SREBF1-213ENST00000485080 SPAG8Q99932 426 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-213ENST00000485080 PSENENQ9NZ42 101 aa13.35□□□□□ -0.27
SREBF1-213ENST00000485080 C5orf51A6NDU8 294 aa13.34□□□□□ -0.27
SREBF1-213ENST00000485080 PMS2P5A8MQ11 134 aa13.34□□□□□ -0.27
SREBF1-213ENST00000485080 PTTG1O95997 202 aa13.34□□□□□ -0.27
SREBF1-213ENST00000485080 GUCA2BQ16661 112 aa13.34□□□□□ -0.27
SREBF1-213ENST00000485080 FAM90A2PQ658T7 463 aa13.34□□□□□ -0.27
SREBF1-213ENST00000485080 GSG1LQ6UXU4 331 aa13.34□□□□□ -0.27
SREBF1-213ENST00000485080 METTL26Q96S19 204 aa13.34□□□□□ -0.27
SREBF1-213ENST00000485080 C19orf73Q9NVV2 129 aa13.34□□□□□ -0.27
SREBF1-213ENST00000485080 U3KQE9 123 aa13.34□□□□□ -0.27
SREBF1-213ENST00000485080 IGKV1D-37A0A075B6S9 117 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 A0A1W2PS18 150 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 C7orf66A4D0T2 115 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 FAM25EA8MYX2 175 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 FNDC10F2Z333 226 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 H3BP45 60 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 SCGB1D2O95969 90 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 NHLRC4P0CG21 123 aaPredicted RBP13.33□□□□□ -0.28
SREBF1-213ENST00000485080 RD3LP0DJH9 198 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 NPPCP23582 126 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 RNF2Q99496 336 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 TRGV9Q99603 122 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 NEURL2Q9BR09 285 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 C11orf1Q9H5F2 150 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 TMEM231Q9H6L2 316 aa13.33□□□□□ -0.28
SREBF1-213ENST00000485080 PAIP2BQ9ULR5 123 aaKnown RBP13.33□□□□□ -0.28
SREBF1-213ENST00000485080 K7EPK0 472 aa13.32□□□□□ -0.28
SREBF1-213ENST00000485080 FABP1P07148 127 aa13.32□□□□□ -0.28
SREBF1-213ENST00000485080 IGHV4-30-4P0DP06 118 aa13.32□□□□□ -0.28
SREBF1-213ENST00000485080 PSG1P11464 419 aa13.32□□□□□ -0.28
SREBF1-213ENST00000485080 CD81P60033 236 aa13.32□□□□□ -0.28
SREBF1-213ENST00000485080 FAM110AQ9BQ89 295 aa13.32□□□□□ -0.28
SREBF1-213ENST00000485080 IGKV1OR2-108A0A075B7D4 117 aa13.31□□□□□ -0.28
SREBF1-213ENST00000485080 ZFP92A6NM28 416 aa13.31□□□□□ -0.28
SREBF1-213ENST00000485080 CD7P09564 240 aa13.31□□□□□ -0.28
SREBF1-213ENST00000485080 FRMD6-AS1P0C7T7 363 aa13.31□□□□□ -0.28
SREBF1-213ENST00000485080 TMEM144Q7Z5S9 345 aa13.31□□□□□ -0.28
SREBF1-213ENST00000485080 OR51G1Q8NGK1 321 aa13.31□□□□□ -0.28
SREBF1-213ENST00000485080 ST8SIA2Q92186 375 aa13.31□□□□□ -0.28
SREBF1-213ENST00000485080 CFDP00746 253 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-213ENST00000485080 APOHP02749 345 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-213ENST00000485080 DLK1P80370 383 aa13.3□□□□□ -0.28
SREBF1-213ENST00000485080 ACOT7LQ6ZUV0 252 aa13.3□□□□□ -0.28
SREBF1-213ENST00000485080 GGACTQ9BVM4 153 aa13.3□□□□□ -0.28
SREBF1-213ENST00000485080 NMES1Q9C002 83 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms