RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 C1QTNF5Q9BXJ0 243 aa12.61□□□□□ -0.39
RXRA-203ENST00000484822 WDR83OSQ9Y284 106 aa12.61□□□□□ -0.39
RXRA-203ENST00000484822 MPDZO75970 2070 aa12.61□□□□□ -0.39
RXRA-203ENST00000484822 TMEM262E9PQX1 116 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 HGFACQ04756 655 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 LY6EQ16553 131 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 MRPL20Q9BYC9 149 aaKnown RBP12.6□□□□□ -0.39
RXRA-203ENST00000484822 LYZL4Q96KX0 146 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 LYPD3O95274 346 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 C3orf79P0CE67 100 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 PSG1P11464 419 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 RPP25LQ8N5L8 163 aaKnown RBP12.6□□□□□ -0.39
RXRA-203ENST00000484822 BMPERQ8N8U9 685 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 TNFRSF18Q9Y5U5 241 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 PPIFP30405 207 aaKnown RBP12.6□□□□□ -0.39
RXRA-203ENST00000484822 TDGF1P3P51864 188 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 Q6ZT83 130 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 EEF1AKMT3Q96AZ1 226 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 TOMM7Q9P0U1 55 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 POLEQ07864 2286 aa12.6□□□□□ -0.39
RXRA-203ENST00000484822 TRBV7-9A0A0J9YWB2 115 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 PAX2Q02962 417 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 CFHR1Q03591 330 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 GAGE2BQ13066 116 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 GAGE2EQ4V326 116 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 SPACA3Q8IXA5 215 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 GAGE2DQ9UEU5 116 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 SRSF4Q08170 494 aaKnown RBP12.59□□□□□ -0.39
RXRA-203ENST00000484822 TSKUQ8WUA8 353 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 CHCHD1Q96BP2 118 aaKnown RBP12.59□□□□□ -0.39
RXRA-203ENST00000484822 CELA3AP09093 270 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 EVI2AP22794 236 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 LHFPL1Q86WI0 220 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 NCOR1O75376 2440 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 KBTBD11-OT1A0A1B0GTJ5 212 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 ZNF815PA8K554 130 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 SAA1P0DJI8 122 aaPredicted RBP12.59□□□□□ -0.39
RXRA-203ENST00000484822 OTORQ9NRC9 128 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 C21orf62Q9NYP8 219 aa12.59□□□□□ -0.39
RXRA-203ENST00000484822 PSG7Q13046 419 aa12.58□□□□□ -0.39
RXRA-203ENST00000484822 LINC01560Q8TB33 94 aa12.58□□□□□ -0.39
RXRA-203ENST00000484822 LSM4Q9Y4Z0 139 aaKnown RBP12.58□□□□□ -0.39
RXRA-203ENST00000484822 TRAV2A0A0B4J234 112 aa12.58□□□□□ -0.4
RXRA-203ENST00000484822 ACTL10Q5JWF8 245 aa12.58□□□□□ -0.4
RXRA-203ENST00000484822 BCL6BQ8N143 479 aaPredicted RBP12.58□□□□□ -0.4
RXRA-203ENST00000484822 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.58□□□□□ -0.4
RXRA-203ENST00000484822 MS4A6AQ9H2W1 248 aa12.58□□□□□ -0.4
RXRA-203ENST00000484822 MED12Q93074 2177 aa12.58□□□□□ -0.4
RXRA-203ENST00000484822 IGKCP01834 107 aa12.58□□□□□ -0.4
RXRA-203ENST00000484822 CYSLTR1Q9Y271 337 aa12.58□□□□□ -0.4
RXRA-203ENST00000484822 IGKV3D-20A0A0C4DH25 116 aa12.58□□□□□ -0.4
RXRA-203ENST00000484822 FBXL7Q9UJT9 491 aa12.58□□□□□ -0.4
RXRA-203ENST00000484822 DOCK4Q8N1I0 1966 aa12.58□□□□□ -0.4
RXRA-203ENST00000484822 A0A1B0GW64 132 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 GUSBP1Q15486 140 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 TRAV8-4A0A0B4J246 113 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 TRAV1-1A0A0B4J248 108 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 TFF1P04155 84 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 PRTN3P24158 256 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 WBP1Q96G27 269 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 ROS1P08922 2347 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 FABP5P3A8MUU1 101 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 OR9G9P0C7N8 305 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 CECR9P0C854 216 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 ATRXP46100 2492 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 SPTBN2O15020 2390 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 PLXNA3P51805 1871 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 TRAV5A0A0B4J249 113 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 GAGE12BA1L429 117 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 C15orf61A6NNL5 157 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 H7C1H1 209 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 SNRPD3P62318 126 aaKnown RBP12.57□□□□□ -0.4
RXRA-203ENST00000484822 RALGAPA1Q6GYQ0 2036 aa12.57□□□□□ -0.4
RXRA-203ENST00000484822 SAA2-SAA4A0A096LPE2 208 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 SAA2P0DJI9 122 aaPredicted RBP12.56□□□□□ -0.4
RXRA-203ENST00000484822 GTSCR1Q86UQ5 136 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 RIF1Q5UIP0 2472 aaKnown RBP12.56□□□□□ -0.4
RXRA-203ENST00000484822 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
RXRA-203ENST00000484822 A8MWP6 167 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 E9PLN8 166 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 UPK2O00526 184 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 ERVK11-1P61568 191 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 NRN1LQ496H8 165 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 SPATA31B1PQ5VZV4 182 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 ZFAND6Q6FIF0 208 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 NPFFR1Q9GZQ6 430 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 CADP27708 2225 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 GLRXP35754 106 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 OR9G4Q8NGQ1 327 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 NXT2Q9NPJ8 142 aaKnown RBP12.56□□□□□ -0.4
RXRA-203ENST00000484822 PSG8Q9UQ74 426 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 TREML4Q6UXN2 200 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 LHFPL4Q7Z7J7 247 aa12.56□□□□□ -0.4
RXRA-203ENST00000484822 IGHV3OR16-10A0A075B7F0 116 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 FREM3P0C091 2139 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 CD300EQ496F6 205 aaPredicted RBP12.55□□□□□ -0.4
RXRA-203ENST00000484822 KIR3DL3Q8N743 410 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 DUX5Q96PT3 197 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 IGLV3-32A0A0A0MS00 114 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms