RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MMDQ15546 238 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 SSX2Q16385 188 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 BSXQ3C1V8 233 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 KHDC3LQ587J8 217 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 FAM122CQ6P4D5 195 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 SPSB3Q6PJ21 355 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 LCN15Q6UWW0 184 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 Q6ZSV7 163 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 TMEM144Q7Z5S9 345 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 OR2T10Q8NGZ9 312 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 SSMEM1Q8WWF3 244 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 SSX3Q99909 188 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 NKX6-2Q9C056 277 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-216ENST00000484087 MRPL18Q9H0U6 180 aaKnown RBP5.5□□□□□ -1.53
BRCA1-216ENST00000484087 SLC35B3Q9H1N7 401 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 PXMP4Q9Y6I8 212 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 SH2D7A6NKC9 451 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-216ENST00000484087 CLDN34H7C241 214 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 NBR2O15453 112 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 CNIH1O95406 144 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 IGKV1D-33P01593 117 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 IGKV1-33P01594 117 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 HSPB1P04792 205 aaKnown RBP5.49□□□□□ -1.53
BRCA1-216ENST00000484087 CRYGBP07316 175 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 FAM106CPP0CH98 169 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 B2MP61769 119 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 GNB1P62873 340 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 HAGHQ16775 308 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 TMEM95Q3KNT9 176 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 SOHLH1Q5JUK2 328 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 ZNF506Q5JVG8 444 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 C10orf91Q5T1B1 145 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 ACSM6Q6P461 480 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 SLC16A13Q7RTY0 426 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 IQCF2Q8IXL9 164 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 RPP25LQ8N5L8 163 aaKnown RBP5.49□□□□□ -1.53
BRCA1-216ENST00000484087 C11orf44Q8N8P7 122 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 OR10W1Q8NGF6 305 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 PIFOQ8TCI5 191 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 TMEM170AQ8WVE7 144 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 MALSU1Q96EH3 234 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 SRSF8Q9BRL6 282 aaKnown RBP5.49□□□□□ -1.53
BRCA1-216ENST00000484087 GGTLC1Q9BX51 225 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 VSIRQ9H7M9 311 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 MANBALQ9NQG1 85 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 GNG13Q9P2W3 67 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 VPREB3Q9UKI3 123 aa5.49□□□□□ -1.53
BRCA1-216ENST00000484087 ZFP92A6NM28 416 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 SCO1O75880 301 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 BCL2P10415 239 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 ADCYAP1P18509 176 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 RPL29P47914 159 aaKnown RBP5.48□□□□□ -1.53
BRCA1-216ENST00000484087 PSMB3P49720 205 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 FGF8P55075 233 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-216ENST00000484087 RHOBP62745 196 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 CCL20P78556 96 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 FOXL1Q12952 345 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 PMS2P11Q13670 270 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 C10orf55Q5SWW7 151 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 Q6ZS46 218 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 ZNF114Q8NC26 417 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 OR1L6Q8NGR2 347 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 LINC01006Q8NI28 216 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 SUN5Q8TC36 379 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 ABHD5Q8WTS1 349 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 WFDC12Q8WWY7 111 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 SRSF12Q8WXF0 261 aaKnown RBP5.48□□□□□ -1.53
BRCA1-216ENST00000484087 RITA1Q96K30 269 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 P2RX4Q99571 388 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 MGST2Q99735 147 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 RARRES2Q99969 163 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 FBXL15Q9H469 300 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 SLC25A22Q9H936 323 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 VAX2Q9UIW0 290 aa5.48□□□□□ -1.53
BRCA1-216ENST00000484087 LSM4Q9Y4Z0 139 aaKnown RBP5.48□□□□□ -1.53
BRCA1-216ENST00000484087 LOC102723971A0A1B0GUV8 181 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 NCBP2LA6PVI3 153 aaKnown RBP5.47□□□□□ -1.53
BRCA1-216ENST00000484087 SEC14L6B5MCN3 397 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 NDUFA3O95167 84 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 CRYBA1P05813 215 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 DEFA4P12838 97 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 TMEM11P17152 192 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 CNTFRP26992 372 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 CEBPGP53567 150 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 BPIFB3P59826 476 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 WT1-ASQ06250 92 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 BTN1A1Q13410 526 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 GAMTQ14353 236 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 ZNF726P1Q15940 193 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 GUCA2BQ16661 112 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 MIC13Q5XKP0 118 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 SLC35E3Q7Z769 313 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 STPG3Q8N7X2 389 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-216ENST00000484087 NPBQ8NG41 125 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 OR1P1Q8NH06 330 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 RXFP4Q8TDU9 374 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 CFHR4Q92496 578 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 RAB24Q969Q5 203 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 ACY3Q96HD9 319 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms