RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 CDX1P47902 265 aaPredicted RBP7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 RND2P52198 227 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 EIF5AP63241 154 aaKnown RBP7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 ARL16Q0P5N6 197 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 RAB31Q13636 194 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 CLINT1Q14677 625 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 KRTAP24-1Q3LI83 254 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 Q56UQ5 140 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 KHDC1LQ5JSQ8 128 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 SPSB3Q6PJ21 355 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 C10orf99Q6UWK7 81 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 TMEM144Q7Z5S9 345 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 C9orf62Q8N4C0 152 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 ZNF491Q8N8L2 437 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 ZNF502Q8TBZ5 544 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 BSCL2Q96G97 398 aaPredicted RBP7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 ACY3Q96HD9 319 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 PARD6GQ9BYG4 376 aaPredicted RBP7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 SMIM3Q9BZL3 60 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 KLK15Q9H2R5 256 aa7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 TSSC4Q9Y5U2 329 aaPredicted RBP7.01□□□□□ -1.29
SHROOM4-204ENST00000483955 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7□□□□□ -1.29
SHROOM4-204ENST00000483955 IGHV3-21A0A0B4J1V1 117 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 TCRBV4S1A1TA0A5B7 111 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 BOLA2-SMG1P6H3BVE0 249 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 NUPL2O15504 423 aaKnown RBP7□□□□□ -1.29
SHROOM4-204ENST00000483955 JTBO76095 146 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 FABP1P07148 127 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 LGALS1P09382 135 aaKnown RBP7□□□□□ -1.29
SHROOM4-204ENST00000483955 DEFA5Q01523 94 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 GAMTQ14353 236 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 LGALSLQ3ZCW2 172 aaPredicted RBP7□□□□□ -1.29
SHROOM4-204ENST00000483955 ZNF343Q6P1L6 599 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 TEPPQ6URK8 271 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 TMUB2Q71RG4 321 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 LURAP1LQ8IV03 231 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 THAP8Q8NA92 274 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 UBAC2Q8NBM4 344 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 SCGB1C1Q8TD33 95 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 C4orf3Q8WVX3 66 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 NPIPB3Q92617 1050 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 C19orf24Q9BVV8 132 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 KCNIP2Q9NS61 270 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 WDR83OSQ9Y284 106 aa7□□□□□ -1.29
SHROOM4-204ENST00000483955 ZFP92A6NM28 416 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 NUDT19A8MXV4 375 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 CD28P10747 220 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 FGF7P21781 194 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 OR10J1P30954 320 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 GPR183P32249 361 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 NKX2-5P52952 324 aaPredicted RBP6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 RUNX1Q01196 453 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 RELQ04864 619 aaPredicted RBP6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 KIAA0141Q14154 515 aaPredicted RBP6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 MLANAQ16655 118 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 CLEC19AQ6UXS0 136 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 LCNL1Q6ZST4 164 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 RAX2Q96IS3 184 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 TRGV9Q99603 122 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 ZNF471Q9BX82 626 aaPredicted RBP6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 KRTAP9-2Q9BYQ4 174 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 WDR61Q9GZS3 305 aaKnown RBP6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 ZMAT4Q9H898 229 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 PEF1Q9UBV8 284 aaKnown RBP6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 LSM4Q9Y4Z0 139 aaKnown RBP6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 MXRA5Q9NR99 2828 aa6.99□□□□□ -1.29
SHROOM4-204ENST00000483955 OR2T8A6NH00 312 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 C17orf112F2Z3M2 114 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 F8W735 103 aaPredicted RBP6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 UBE2CO00762 179 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 TGOLN2O43493 480 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 CFDP00746 253 aaPredicted RBP6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 IGHV3-11P01762 117 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 IGHV3-48P01763 117 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 IGHV3-23P01764 117 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 IGLC1P0CG04 106 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 TPT1P13693 172 aaKnown RBP6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 ARL3P36405 182 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 RIPPLY3P57055 190 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 SELENOTP62341 195 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 OPCMLQ14982 345 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 TCTEX1D4Q5JR98 221 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 BTNL8Q6UX41 500 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 SLC51BQ86UW2 128 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 NDUFA11Q86Y39 141 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 ZNF709Q8N972 641 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 KLHL30-AS1Q8NEE0 82 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 STOML3Q8TAV4 291 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 CITED2Q99967 270 aaPredicted RBP6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 NPCDR1Q9BY65 106 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 GNB4Q9HAV0 340 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 WFDC1Q9HC57 220 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 MRPL36Q9P0J6 103 aaKnown RBP6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 S4R3C0 116 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 MTORP42345 2549 aa6.98□□□□□ -1.29
SHROOM4-204ENST00000483955 IGKV1D-37A0A075B6S9 117 aa6.97□□□□□ -1.29
SHROOM4-204ENST00000483955 I3L521 148 aa6.97□□□□□ -1.29
SHROOM4-204ENST00000483955 AGPAT2O15120 278 aa6.97□□□□□ -1.29
SHROOM4-204ENST00000483955 GGCTO75223 188 aaKnown RBP6.97□□□□□ -1.29
SHROOM4-204ENST00000483955 TOMM40O96008 361 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms