RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 H3BQ15 152 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 MOSP00540 346 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 ARL14EPLP0DKL9 152 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 SNRPEP62304 92 aaKnown RBP7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 ZNF90Q03938 601 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 PLGLAQ15195 96 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 FAM120AOSQ5T036 256 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.03□□□□□ -1.284e-10■■□□□ 12
CDC42SE1-204ENST00000483763 CACNG8Q8WXS5 425 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 NPIPB3Q92617 1050 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 RNF5Q99942 180 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 PIMREGQ9BSJ6 248 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 VAX2Q9UIW0 290 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 A0A1W2PPV4 95 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 M0R036 132 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 NBR2O15453 112 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 SOX15O60248 233 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 PAGE4O60829 102 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 SAA4P35542 130 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 UBE2E1P51965 193 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 PMS2P11Q13670 270 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 RNF212Q495C1 297 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 PVRIGQ6DKI7 326 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 SLC35E3Q7Z769 313 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 NPBQ8NG41 125 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 RNASEH2CQ8TDP1 164 aaKnown RBP7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 TMEM37Q8WXS4 190 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 TXN2Q99757 166 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 RPS10P5Q9NQ39 176 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 CSPG4Q6UVK1 2322 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 MTORP42345 2549 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 IGHV3OR16-10A0A075B7F0 116 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 NDUFA3O95167 84 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 STAG3L2P0CL84 134 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 STAG3L3P0CL85 134 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 HNF1AP20823 631 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 MEF2BQ02080 365 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 RAB31Q13636 194 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 MORN5Q5VZ52 161 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 ZFP82Q8N141 532 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 Q8N6K4 173 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 OR51G1Q8NGK1 321 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 ISOC2Q96AB3 205 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 MISP3Q96FF7 219 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 SLC25A33Q9BSK2 321 aa7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 GSX1Q9H4S2 264 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE1-204ENST00000483763 CENPVL3A0A0U1RRI6 287 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 CRYGCP07315 174 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 NPPCP23582 126 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 MAS1LP35410 378 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 UBE2G2P60604 165 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 NDPQ00604 133 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 PAX8Q06710 450 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 KIAA0141Q14154 515 aaPredicted RBP7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 MINOS1Q5TGZ0 78 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 FAM78BQ5VT40 261 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 ETFRF1Q6IPR1 90 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 SPNS3Q6ZMD2 512 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 MIR17HGQ75NE6 70 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 ZNF114Q8NC26 417 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 RPH3ALQ9UNE2 315 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 POLR3KQ9Y2Y1 108 aaPredicted RBP7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 MINOS1-NBL1R4GNA1 71 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 PSMB11A5LHX3 300 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 NCBP2LA6PVI3 153 aaKnown RBP7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 CNIH1O95406 144 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 RND2P52198 227 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 SUB1P53999 127 aaKnown RBP eCLIP7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 FXYD3Q14802 87 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 C5orf64Q2M2E5 130 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 KLF17Q5JT82 389 aaPredicted RBP7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 C9orf152Q5JTZ5 239 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 CCDC144NLQ6NUI1 221 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 C15orf54Q8N8G6 183 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 OR1P1Q8NH06 330 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 C14orf144Q96I85 54 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 C2orf88Q9BSF0 95 aa7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 F11RQ9Y624 299 aaKnown RBP7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 SOX21Q9Y651 276 aaPredicted RBP7.01□□□□□ -1.29
CDC42SE1-204ENST00000483763 ZNF727A8MUV8 499 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 C1orf196B1AJZ1 125 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 ATP5G3P48201 142 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 PSMB3P49720 205 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 CX3CL1P78423 397 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 EBI3Q14213 229 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 TMEM249Q2WGJ8 235 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 ASPHD1Q5U4P2 390 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 OR2T10Q8NGZ9 312 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 MALSU1Q96EH3 234 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 ZNF503Q96F45 646 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 SLC35E1Q96K37 410 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 F8P00451 2351 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 FLNAP21333 2647 aaKnown RBP7□□□□□ -1.29
CDC42SE1-204ENST00000483763 SERTM2A0A1B0GWG4 89 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 MT-CO2P00403 227 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 PATE2Q6UY27 113 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 BRD3OSQ6XYD6 125 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 CYP2G1PQ6ZSU1 146 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 OR4F5Q8NH21 305 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 HIST1H2BAQ96A08 127 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms