RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 TRAV30A0A087WSZ9 112 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 A0A1W2PPV4 95 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 TCRBV4S1A1TA0A5B7 111 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 DNAJC9-AS1A6NH13 148 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 I3L2K1 104 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 GNG7O60262 68 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 NMBP08949 121 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 FAM157CP0CG43 387 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 RPL29P47914 159 aaKnown RBP9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 SLC35B1P78383 322 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 RHOGP84095 191 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 ATP5G2Q06055 141 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 MIC13Q5XKP0 118 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 CENPVQ7Z7K6 275 aaPredicted RBP9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 STPG3Q8N7X2 389 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 NECAP1Q8NC96 275 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 OR10G4Q8NGN3 311 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 OR4X1Q8NH49 305 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 EEF1AKMT3Q96AZ1 226 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 MS4A10Q96PG2 267 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 ACTR3CQ9C0K3 210 aaPredicted RBP9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 GAR1Q9NY12 217 aaKnown RBP9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 LSM4Q9Y4Z0 139 aaKnown RBP9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 RFNGQ9Y644 331 aa9.78□□□□□ -0.84
TSPAN1-208ENST00000482928 FAM223BA6NKX1 122 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 H3BUA1 57 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 HBE1P02100 147 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 TRGV3P03979 118 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 H2AFB1P0C5Y9 115 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 PF4V1P10720 104 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 M6PRP20645 277 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 MDKP21741 143 aaPredicted RBP9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 TPPP2P59282 170 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 PXDC1Q5TGL8 231 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 FAM122CQ6P4D5 195 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 FAM223AQ8IWN6 122 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 THAP8Q8NA92 274 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 TMEM116Q8NCL8 245 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 BPIFCQ8NFQ6 507 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 VN1R17PQ8TDU5 208 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 NOL4LQ96MY1 436 aaPredicted RBP9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 FANCD2OSQ96PS1 177 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 TRGV9Q99603 122 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 HRH4Q9H3N8 390 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 SLC39A9Q9NUM3 307 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 DMRT1Q9Y5R6 373 aa9.77□□□□□ -0.85
TSPAN1-208ENST00000482928 K7EIM0 57 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 COX7A2P2O60397 106 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 CLN5O75503 358 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 NDUFB8O95169 186 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 C15orf32Q32M92 178 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 COMMD7Q86VX2 200 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 OR1L4Q8NGR5 311 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 TXN2Q99757 166 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 ZNF580Q9UK33 172 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 SLC45A2Q9UMX9 530 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
TSPAN1-208ENST00000482928 A0A1B0GV50 99 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 NUDT19A8MXV4 375 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 NUPL2O15504 423 aaKnown RBP9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 LINC00869P0C866 280 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 CDC34P49427 236 aaPredicted RBP9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 RHOBP62745 196 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 DEFA5Q01523 94 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 IQCF2Q8IXL9 164 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 SFT2D1Q8WV19 159 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 PFDN5Q99471 154 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 RNF2Q99496 336 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 SLC25A22Q9H936 323 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 GNB4Q9HAV0 340 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 RPRMQ9NS64 109 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 S4R3C0 116 aa9.75□□□□□ -0.85
TSPAN1-208ENST00000482928 IGKV1OR2-108A0A075B7D4 117 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 TRBV7-1A0A0A6YYK4 115 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 A0A0G2JLM5 398 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 CTXND1A0A1B0GTU2 59 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 PSMB11A5LHX3 300 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 LINC00862A6NCI5 91 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 MFSD2BA6NFX1 497 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 CLDN34H7C241 214 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 IGHV3-23P01764 117 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 FHITP49789 147 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 TMEM95Q3KNT9 176 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 TIGITQ495A1 244 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 C19orf54Q5BKX5 351 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 LCN15Q6UWW0 184 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 Q6ZS46 218 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 S100A7AQ86SG5 101 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 Q8WTZ3 238 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 USMG5Q96IX5 58 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 VSIRQ9H7M9 311 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 ZNF702PQ9H963 129 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 PLA2G2EQ9NZK7 142 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 MRPL36Q9P0J6 103 aaKnown RBP9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 DOK5Q9P104 306 aa9.74□□□□□ -0.85
TSPAN1-208ENST00000482928 TRBV9A0A0B4J1U6 114 aa9.73□□□□□ -0.85
TSPAN1-208ENST00000482928 MAP1LC3B2A6NCE7 125 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms