RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 A0A1W2PRM7 423 aa12.54□□□□□ -0.4
RXRA-202ENST00000481739 CD99P14209 185 aa12.54□□□□□ -0.4
RXRA-202ENST00000481739 SSBP2P81877 361 aaPredicted RBP12.54□□□□□ -0.4
RXRA-202ENST00000481739 ELOBQ15370 118 aa12.54□□□□□ -0.4
RXRA-202ENST00000481739 STXBP6Q8NFX7 210 aa12.54□□□□□ -0.4
RXRA-202ENST00000481739 BIN3Q9NQY0 253 aa12.54□□□□□ -0.4
RXRA-202ENST00000481739 TNFRSF19Q9NS68 423 aa12.54□□□□□ -0.4
RXRA-202ENST00000481739 OR7C2O60412 319 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 MFAP2P55001 183 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 HES1Q14469 280 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 C10orf113Q5VZT2 155 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 Q8N6K4 173 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 TMEM37Q8WXS4 190 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 MBD6Q96DN6 1003 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 C1RLQ9NZP8 487 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 ABCA2Q9BZC7 2435 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 A0A1W2PRE2 83 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 FABP1P07148 127 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 CTRB1P17538 263 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 NPPCP23582 126 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 GATA2P23769 480 aaPredicted RBP12.53□□□□□ -0.4
RXRA-202ENST00000481739 CTRB2Q6GPI1 263 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 ZNF562Q6V9R5 426 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 YTHDF2Q9Y5A9 579 aaKnown RBP12.53□□□□□ -0.4
RXRA-202ENST00000481739 LY96Q9Y6Y9 160 aa12.53□□□□□ -0.4
RXRA-202ENST00000481739 FCN1O00602 326 aa12.52□□□□□ -0.41
RXRA-202ENST00000481739 PPP1R2P9O14990 202 aa12.52□□□□□ -0.41
RXRA-202ENST00000481739 NDUFB4O95168 129 aa12.52□□□□□ -0.41
RXRA-202ENST00000481739 FAM106CPP0CH98 169 aa12.52□□□□□ -0.41
RXRA-202ENST00000481739 BRS3P32247 399 aa12.52□□□□□ -0.41
RXRA-202ENST00000481739 PLP1P60201 277 aa12.52□□□□□ -0.41
RXRA-202ENST00000481739 FXYD3Q14802 87 aa12.52□□□□□ -0.41
RXRA-202ENST00000481739 OR51G1Q8NGK1 321 aa12.52□□□□□ -0.41
RXRA-202ENST00000481739 OR4X1Q8NH49 305 aa12.52□□□□□ -0.41
RXRA-202ENST00000481739 TBX15Q96SF7 602 aa12.52□□□□□ -0.41
RXRA-202ENST00000481739 TRBV24-1A0A075B6N3 115 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 C9JCJ5 164 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 RNF223E7ERA6 249 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 H7BYZ3 331 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 S100PP25815 95 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 Q8WTZ3 238 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 SSX3Q99909 188 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 TCEAL7Q9BRU2 100 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 NPIPB5A8MRT5 1133 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 B4DSR2 109 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 MSMBP08118 114 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 ZNF90Q03938 601 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 Q96MF0 132 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 OR5B12Q96R08 314 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 WNT10AQ9GZT5 417 aa12.51□□□□□ -0.41
RXRA-202ENST00000481739 HECTD1Q9ULT8 2610 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 UNC79Q9P2D8 2635 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 NAV3Q8IVL0 2385 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 I3L2K1 104 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 TMEM11P17152 192 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 MAPK1IP1LQ8NDC0 245 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 TMEM190Q8WZ59 177 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 ZNF503Q96F45 646 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 BTF3L4Q96K17 158 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 FAM167A-AS1Q96KT0 104 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 SLC25A2Q9BXI2 301 aa12.5□□□□□ -0.41
RXRA-202ENST00000481739 MRPL36Q9P0J6 103 aaKnown RBP12.5□□□□□ -0.41
RXRA-202ENST00000481739 SCO2A0A1W2PP80 73 aa12.49□□□□□ -0.41
RXRA-202ENST00000481739 UBE2L3P68036 154 aaKnown RBP12.49□□□□□ -0.41
RXRA-202ENST00000481739 C16orf82Q7Z2V1 217 aa12.49□□□□□ -0.41
RXRA-202ENST00000481739 OR5AU1Q8NGC0 362 aa12.49□□□□□ -0.41
RXRA-202ENST00000481739 ARPC1AQ92747 370 aa12.49□□□□□ -0.41
RXRA-202ENST00000481739 ZNF355PQ9NSJ1 428 aa12.49□□□□□ -0.41
RXRA-202ENST00000481739 URGCP-MRPS24S4R325 110 aa12.49□□□□□ -0.41
RXRA-202ENST00000481739 RPS10P46783 165 aaKnown RBP12.48□□□□□ -0.41
RXRA-202ENST00000481739 PAX8Q06710 450 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 KIAA0141Q14154 515 aaPredicted RBP12.48□□□□□ -0.41
RXRA-202ENST00000481739 DYNAPQ8N1N2 210 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 IMMP2LQ96T52 175 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 ITPR2Q14571 2701 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 A0A096LNT2 108 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 HYPMO75409 117 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 S100A6P06703 90 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 IGLC1P0CG04 106 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 SRP14P37108 136 aaKnown RBP12.48□□□□□ -0.41
RXRA-202ENST00000481739 LOXL1Q08397 574 aaPredicted RBP12.48□□□□□ -0.41
RXRA-202ENST00000481739 ZNF343Q6P1L6 599 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 PRSS57Q6UWY2 283 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 LINC01356Q8N9X3 169 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 FAM210BQ96KR6 192 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 ZNF48Q96MX3 618 aaPredicted RBP12.48□□□□□ -0.41
RXRA-202ENST00000481739 PAXXQ9BUH6 204 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 OR51M1Q9H341 326 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 HIF1ANQ9NWT6 349 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 DMRT1Q9Y5R6 373 aa12.48□□□□□ -0.41
RXRA-202ENST00000481739 NCBP2LA6PVI3 153 aaKnown RBP12.47□□□□□ -0.41
RXRA-202ENST00000481739 NPFFO15130 113 aa12.47□□□□□ -0.41
RXRA-202ENST00000481739 IGHV3-48P01763 117 aa12.47□□□□□ -0.41
RXRA-202ENST00000481739 APELAP0DMC3 54 aa12.47□□□□□ -0.41
RXRA-202ENST00000481739 SAA4P35542 130 aa12.47□□□□□ -0.41
RXRA-202ENST00000481739 CX3CL1P78423 397 aa12.47□□□□□ -0.41
RXRA-202ENST00000481739 PATE2Q6UY27 113 aa12.47□□□□□ -0.41
RXRA-202ENST00000481739 LINC00305Q7Z4B0 112 aa12.47□□□□□ -0.41
RXRA-202ENST00000481739 TTC9CQ8N5M4 171 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms