RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 VSIRQ9H7M9 311 aa13.96□□□□□ -0.17
HSPG2-210ENST00000481644 IGKV3-7A0A075B6H7 116 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 IGHV3-66A0A0C4DH42 116 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 MED6O75586 246 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 CD5P06127 495 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 OR4E1P0C645 316 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 IAPPP10997 89 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 NPPCP23582 126 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 TFPI2P48307 235 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 ATP5IP56385 69 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-210ENST00000481644 DHRS2Q13268 280 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 ODF3L2Q3SX64 289 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 FAM90A2PQ658T7 463 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 TCF24Q7RTU0 167 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 COQ8AQ8NI60 647 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 NPIPB3Q92617 1050 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 CITED4Q96RK1 184 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 METTL26Q96S19 204 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 GGTLC1Q9BX51 225 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 TMEM231Q9H6L2 316 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 RETNQ9HD89 108 aa13.95□□□□□ -0.18
HSPG2-210ENST00000481644 STAB2Q8WWQ8 2551 aa13.94□□□□□ -0.18
HSPG2-210ENST00000481644 LOC102724200A0A096LPH7 203 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-210ENST00000481644 ANXA7P20073 488 aaKnown RBP13.94□□□□□ -0.18
HSPG2-210ENST00000481644 YPEL3P61236 119 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-210ENST00000481644 C4orf46Q504U0 113 aa13.94□□□□□ -0.18
HSPG2-210ENST00000481644 LYG2Q86SG7 212 aa13.94□□□□□ -0.18
HSPG2-210ENST00000481644 Q8WTZ3 238 aa13.94□□□□□ -0.18
HSPG2-210ENST00000481644 A0A1W2PS18 150 aa13.93□□□□□ -0.18
HSPG2-210ENST00000481644 PLA2G10O15496 165 aa13.93□□□□□ -0.18
HSPG2-210ENST00000481644 LYRM1O43325 122 aa13.93□□□□□ -0.18
HSPG2-210ENST00000481644 ADAP1O75689 374 aa13.93□□□□□ -0.18
HSPG2-210ENST00000481644 PAFAH1B2P68402 229 aa13.93□□□□□ -0.18
HSPG2-210ENST00000481644 CNPY1Q3B7I2 92 aa13.93□□□□□ -0.18
HSPG2-210ENST00000481644 GBGT1Q8N5D6 347 aa13.93□□□□□ -0.18
HSPG2-210ENST00000481644 NARS2Q96I59 477 aaKnown RBP13.93□□□□□ -0.18
HSPG2-210ENST00000481644 CIB3Q96Q77 187 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-210ENST00000481644 FAM110AQ9BQ89 295 aa13.93□□□□□ -0.18
HSPG2-210ENST00000481644 MAGT1Q9H0U3 335 aa13.93□□□□□ -0.18
HSPG2-210ENST00000481644 TENM3Q9P273 2699 aa13.93□□□□□ -0.18
HSPG2-210ENST00000481644 C3orf84H3BNL1 204 aa13.92□□□□□ -0.18
HSPG2-210ENST00000481644 SYNGR2O43760 224 aa13.92□□□□□ -0.18
HSPG2-210ENST00000481644 DFFBO76075 338 aa13.92□□□□□ -0.18
HSPG2-210ENST00000481644 IFNA21P01568 189 aa13.92□□□□□ -0.18
HSPG2-210ENST00000481644 CRYBB3P26998 211 aa13.92□□□□□ -0.18
HSPG2-210ENST00000481644 RAB11AP62491 216 aa13.92□□□□□ -0.18
HSPG2-210ENST00000481644 RPL11P62913 178 aaKnown RBP13.92□□□□□ -0.18
HSPG2-210ENST00000481644 LINC00299Q6ZSB3 139 aa13.92□□□□□ -0.18
HSPG2-210ENST00000481644 LILRB2Q8N423 598 aa13.92□□□□□ -0.18
HSPG2-210ENST00000481644 MUC7Q8TAX7 377 aa13.92□□□□□ -0.18
HSPG2-210ENST00000481644 CCDC32Q9BV29 185 aa13.92□□□□□ -0.18
HSPG2-210ENST00000481644 PAIP2BQ9ULR5 123 aaKnown RBP13.92□□□□□ -0.18
HSPG2-210ENST00000481644 WRBO00258 174 aa13.91□□□□□ -0.18
HSPG2-210ENST00000481644 GPX4P36969 197 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-210ENST00000481644 CMC4P56277 68 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-210ENST00000481644 SLC35E1Q96K37 410 aa13.91□□□□□ -0.18
HSPG2-210ENST00000481644 C20orf85Q9H1P6 137 aa13.91□□□□□ -0.18
HSPG2-210ENST00000481644 EDA2RQ9HAV5 297 aa13.91□□□□□ -0.18
HSPG2-210ENST00000481644 A6NHS1 94 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 MPTX1A8MV57 137 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 DNASE2O00115 360 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-210ENST00000481644 TOMM40O96008 361 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 IL4P05112 153 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 RD3LP0DJH9 198 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 P2RY1P47900 373 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 RPP30P78346 268 aaKnown RBP13.9□□□□□ -0.18
HSPG2-210ENST00000481644 GAMTQ14353 236 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 WFDC3Q8IUB2 231 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 S100ZQ8WXG8 99 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 GRAMD2BQ96HH9 432 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 MS4A6AQ9H2W1 248 aa13.9□□□□□ -0.18
HSPG2-210ENST00000481644 HNRNPCP07910 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
HSPG2-210ENST00000481644 APOC4P55056 127 aa13.89□□□□□ -0.19
HSPG2-210ENST00000481644 APRG1Q8IVJ8 170 aa13.89□□□□□ -0.19
HSPG2-210ENST00000481644 TRAV2A0A0B4J234 112 aa13.88□□□□□ -0.19
HSPG2-210ENST00000481644 ZFP92A6NM28 416 aa13.88□□□□□ -0.19
HSPG2-210ENST00000481644 TCRBP04435 133 aa13.88□□□□□ -0.19
HSPG2-210ENST00000481644 ID3Q02535 119 aa13.88□□□□□ -0.19
HSPG2-210ENST00000481644 USF2Q15853 346 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-210ENST00000481644 SPANXN5Q5MJ07 72 aa13.88□□□□□ -0.19
HSPG2-210ENST00000481644 MAP6D1Q9H9H5 199 aa13.88□□□□□ -0.19
HSPG2-210ENST00000481644 RABAC1Q9UI14 185 aa13.88□□□□□ -0.19
HSPG2-210ENST00000481644 U3KQE9 123 aa13.88□□□□□ -0.19
HSPG2-210ENST00000481644 TRAV6A0A075B6T7 132 aa13.87□□□□□ -0.19
HSPG2-210ENST00000481644 H3BP45 60 aa13.87□□□□□ -0.19
HSPG2-210ENST00000481644 PSG1P11464 419 aa13.87□□□□□ -0.19
HSPG2-210ENST00000481644 RPL35AP18077 110 aaKnown RBP13.87□□□□□ -0.19
HSPG2-210ENST00000481644 NKX2-1P43699 371 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-210ENST00000481644 ZNF124Q15973 351 aa13.87□□□□□ -0.19
HSPG2-210ENST00000481644 STXBP6Q8NFX7 210 aa13.87□□□□□ -0.19
HSPG2-210ENST00000481644 OR4D5Q8NGN0 318 aa13.87□□□□□ -0.19
HSPG2-210ENST00000481644 MITD1Q8WV92 249 aa13.87□□□□□ -0.19
HSPG2-210ENST00000481644 IGKV1D-37A0A075B6S9 117 aa13.86□□□□□ -0.19
HSPG2-210ENST00000481644 LYL1P12980 280 aa13.86□□□□□ -0.19
HSPG2-210ENST00000481644 EIF2B2P49770 351 aaKnown RBP13.86□□□□□ -0.19
HSPG2-210ENST00000481644 POLR2GP62487 172 aaKnown RBP eCLIP13.86□□□□□ -0.19
HSPG2-210ENST00000481644 OR51G1Q8NGK1 321 aa13.86□□□□□ -0.19
HSPG2-210ENST00000481644 RNF125Q96EQ8 232 aa13.86□□□□□ -0.19
HSPG2-210ENST00000481644 NUDT15Q9NV35 164 aa13.86□□□□□ -0.19
HSPG2-210ENST00000481644 STRAPQ9Y3F4 350 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms