RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 GPR146Q96CH1 333 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 MDFIQ99750 246 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 ENY2Q9NPA8 101 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 TPSG1Q9NRR2 321 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 NDUFA4L2Q9NRX3 87 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 THYN1Q9P016 225 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 KLK9Q9UKQ9 250 aa6.48□□□□□ -1.37
USP54-212ENST00000480210 TSSC4Q9Y5U2 329 aaPredicted RBP6.48□□□□□ -1.37
USP54-212ENST00000480210 TCRBV4S1A1TA0A5B7 111 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 UMAD1C9J7I0 102 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 MED6O75586 246 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 PSMB8P28062 276 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 RPS10P46783 165 aaKnown RBP6.47□□□□□ -1.37
USP54-212ENST00000480210 RAB9AP51151 201 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 SUB1P53999 127 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP54-212ENST00000480210 SSBP2P81877 361 aaPredicted RBP6.47□□□□□ -1.37
USP54-212ENST00000480210 NDPQ00604 133 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 PRCDQ00LT1 54 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 ECSCRQ19T08 205 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 NMSQ5H8A3 153 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 PET117Q6UWS5 81 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 SMIM15Q7Z3B0 74 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 OR2D3Q8NGH3 330 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 OR10G4Q8NGN3 311 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 CASTOR1Q8WTX7 329 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 ACY3Q96HD9 319 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 USMG5Q96IX5 58 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 UBE2E2Q96LR5 201 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 CTDSP1Q9GZU7 261 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 HRH4Q9H3N8 390 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 DOK5Q9P104 306 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 WSB1Q9Y6I7 421 aa6.47□□□□□ -1.37
USP54-212ENST00000480210 TRAV3A0A0B4J244 114 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 FAM223BA6NKX1 122 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 COL6A5A8TX70 2615 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 TEX22C9J3V5 150 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 G3V318 75 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 DLEU1O43261 78 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 HBE1P02100 147 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 RPLP1P05386 114 aaKnown RBP6.46□□□□□ -1.38
USP54-212ENST00000480210 SNCAP37840 140 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 NDUFA6P56556 154 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 GUK1Q16774 197 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 TMEM241Q24JQ0 296 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 TMEM95Q3KNT9 176 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 ANKRD55Q3KP44 614 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 SOHLH1Q5JUK2 328 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 DPPA3Q6W0C5 159 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 LYZL2Q7Z4W2 148 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 ZNF329Q86UD4 541 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 FAM223AQ8IWN6 122 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 OR10D4PQ8NGN7 298 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 RBMXL1Q96E39 390 aaKnown RBP6.46□□□□□ -1.38
USP54-212ENST00000480210 RCC1LQ96I51 464 aaKnown RBP6.46□□□□□ -1.38
USP54-212ENST00000480210 ATP6V0BQ99437 205 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 FAM103A1Q9BTL3 118 aaKnown RBP6.46□□□□□ -1.38
USP54-212ENST00000480210 HIPK2Q9H2X6 1198 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 PLEKHA3Q9HB20 300 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 VAX2Q9UIW0 290 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 LINC00527Q9UJ94 153 aa6.46□□□□□ -1.38
USP54-212ENST00000480210 CHTOPQ9Y3Y2 248 aaKnown RBP6.46□□□□□ -1.38
USP54-212ENST00000480210 TRBV9A0A0B4J1U6 114 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 C5orf51A6NDU8 294 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 M0QZ24 198 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 CORTO00230 105 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 ST8SIA3O43173 380 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 PITX3O75364 302 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 PF4V1P10720 104 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 DEFA4P12838 97 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 ERVFC1-1P60608 527 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 RPL23AP62750 156 aaKnown RBP6.45□□□□□ -1.38
USP54-212ENST00000480210 RPP30P78346 268 aaKnown RBP6.45□□□□□ -1.38
USP54-212ENST00000480210 RUNX1Q01196 453 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 C2orf68Q2NKX9 166 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 COA6Q5JTJ3 125 aaKnown RBP6.45□□□□□ -1.38
USP54-212ENST00000480210 ASPHD1Q5U4P2 390 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 GGNBP1Q5YKI7 109 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 TMEM183AQ8IXX5 376 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 HIST3H2BBQ8N257 126 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 OR2C3Q8N628 320 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 ZNF491Q8N8L2 437 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 ZNF114Q8NC26 417 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 NECAP1Q8NC96 275 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 OR4F17Q8NGA8 305 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 OR52B4Q8NGK2 314 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 MYOZ3Q8TDC0 251 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 TMED6Q8WW62 240 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 TAF15Q92804 592 aaKnown RBP eCLIP6.45□□□□□ -1.38
USP54-212ENST00000480210 TMEM18Q96B42 140 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 MISP3Q96FF7 219 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 BSCL2Q96G97 398 aaPredicted RBP6.45□□□□□ -1.38
USP54-212ENST00000480210 C2orf50Q96LR7 162 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 CIB3Q96Q77 187 aaPredicted RBP6.45□□□□□ -1.38
USP54-212ENST00000480210 OR4F4Q96R69 305 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 ZNF355PQ9NSJ1 428 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 OR5AC2Q9NZP5 309 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 CACNG5Q9UF02 275 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 NSG2Q9Y328 171 aa6.45□□□□□ -1.38
USP54-212ENST00000480210 A0A0G2JRQ6 117 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 C13orf42A0A1B0GVH6 325 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms