RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CATR1Q13166 79 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 DHRS2Q13268 280 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 RTL8BQ17RB0 113 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 ZNF674Q2M3X9 581 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 C2orf68Q2NKX9 166 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 ABCA11PQ4W5N1 156 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 RPL39P5Q59GN2 51 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 SOHLH1Q5JUK2 328 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 FAM53AQ6NSI3 398 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-209ENST00000479532 TOMM20LQ6UXN7 152 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 DPPA3Q6W0C5 159 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 ZNF66Q6ZN08 573 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 ODF3L1Q8IXM7 274 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 DRAM1Q8N682 238 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 OR2T10Q8NGZ9 312 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 OR1P1Q8NH06 330 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 TMED6Q8WW62 240 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 LINC00476Q8WZB0 136 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 ST6GALNAC6Q969X2 333 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 MOB3AQ96BX8 217 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 SLC35E1Q96K37 410 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 ZNF48Q96MX3 618 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-209ENST00000479532 HSD17B10Q99714 261 aaKnown RBP4.94□□□□□ -1.62
SF3B1-209ENST00000479532 PYGO2Q9BRQ0 406 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 MRPL20Q9BYC9 149 aaKnown RBP4.94□□□□□ -1.62
SF3B1-209ENST00000479532 PRO1933Q9H354 126 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 SRD5A3Q9H8P0 318 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 C1RLQ9NZP8 487 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 C14orf166Q9Y224 244 aaKnown RBP4.94□□□□□ -1.62
SF3B1-209ENST00000479532 TCF19Q9Y242 345 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 WASHC3Q9Y3C0 194 aa4.94□□□□□ -1.62
SF3B1-209ENST00000479532 SOX21Q9Y651 276 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-209ENST00000479532 NAV3Q8IVL0 2385 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 TRAV30A0A087WSZ9 112 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 A0A1W2PPI3 338 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 H0Y8G0 127 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 MOSP00540 346 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 IGKV1D-33P01593 117 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 IGKV1-33P01594 117 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 IGHV4-59P01825 116 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 MBPP02686 304 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-209ENST00000479532 TRGC1P0CF51 173 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 LPAR6P43657 344 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 SLC9A3R2Q15599 337 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 LY6EQ16553 131 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 PRSS8Q16651 343 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 TMEM183BQ1AE95 376 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 BSXQ3C1V8 233 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 UTF1Q5T230 341 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 KCTD9Q7L273 389 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 PDPNQ86YL7 162 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 DYNAPQ8N1N2 210 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 MTURNQ8N3F0 131 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 CCDC71LQ8N9Z2 235 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 OR52B4Q8NGK2 314 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 RNASE8Q8TDE3 154 aaKnown RBP4.93□□□□□ -1.62
SF3B1-209ENST00000479532 CD300LFQ8TDQ1 290 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 GLMPQ8WWB7 406 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 NABP2Q9BQ15 211 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 AGMATQ9BSE5 352 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 PARP12Q9H0J9 701 aaKnown RBP4.93□□□□□ -1.62
SF3B1-209ENST00000479532 HRH4Q9H3N8 390 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 RBKSQ9H477 322 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 BEX1Q9HBH7 125 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 SLC35D1Q9NTN3 355 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 KIAA1456Q9P272 454 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 MOB4Q9Y3A3 225 aa4.93□□□□□ -1.62
SF3B1-209ENST00000479532 ZANQ9Y493 2812 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 TLN2Q9Y4G6 2542 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 TGIF2-C20orf24A0A0A6YYL0 155 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 BORCS7-ASMTA0A0B4J1R7 106 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 IGHV3-72A0A0B4J1Y9 119 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 IGKV1D-13A0A0B4J2D9 117 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 A6NDX4 124 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 NCBP2LA6PVI3 153 aaKnown RBP4.92□□□□□ -1.62
SF3B1-209ENST00000479532 H0YJW9 148 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 CCSO14618 274 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 GPR137BO60478 399 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 VENTXO95231 258 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 HLA-AP01891 365 aaKnown RBP4.92□□□□□ -1.62
SF3B1-209ENST00000479532 TYMSP04818 313 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 IGKV1-13P0DP09 117 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 DUTP33316 252 aaKnown RBP4.92□□□□□ -1.62
SF3B1-209ENST00000479532 RHOGP84095 191 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 RPL19P84098 196 aaKnown RBP4.92□□□□□ -1.62
SF3B1-209ENST00000479532 OR5I1Q13606 314 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 DIAPH2-AS1Q14236 149 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 PLGLAQ15195 96 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 LDLRAD2Q5SZI1 272 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 AADACL3Q5VUY0 350 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 IGFL4Q6B9Z1 124 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 TEX43Q6ZNM6 134 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 ZNF818PQ6ZRF7 136 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 Q6ZRG5 221 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 TMEM219Q86XT9 240 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 TCTEX1D1Q8N7M0 179 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 ZNF738Q8NE65 137 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 OR4D5Q8NGN0 318 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 OR4C13Q8NGP0 309 aa4.92□□□□□ -1.62
SF3B1-209ENST00000479532 OR5B3Q8NH48 314 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms