RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 RFESDQ8TAC1 157 aa17.27■□□□□ 0.35
SDF4-206ENST00000478938 C20orf78Q9BR46 151 aa17.27■□□□□ 0.35
SDF4-206ENST00000478938 AP5S1Q9NUS5 200 aa17.27■□□□□ 0.35
SDF4-206ENST00000478938 ZNF503-AS2A6NEH8 195 aa17.26■□□□□ 0.35
SDF4-206ENST00000478938 KLRC4-KLRK1H3BQV0 150 aa17.26■□□□□ 0.35
SDF4-206ENST00000478938 J3QT63 122 aa17.26■□□□□ 0.35
SDF4-206ENST00000478938 PYYP10082 97 aa17.26■□□□□ 0.35
SDF4-206ENST00000478938 ZNF418Q8TF45 676 aaPredicted RBP17.26■□□□□ 0.35
SDF4-206ENST00000478938 F8W1H4 67 aa17.26■□□□□ 0.35
SDF4-206ENST00000478938 H3BMG7 143 aa17.26■□□□□ 0.35
SDF4-206ENST00000478938 TFF1P04155 84 aa17.26■□□□□ 0.35
SDF4-206ENST00000478938 CCL3P10147 92 aa17.26■□□□□ 0.35
SDF4-206ENST00000478938 LIFP15018 202 aa17.26■□□□□ 0.35
SDF4-206ENST00000478938 HOXA4Q00056 320 aaPredicted RBP17.26■□□□□ 0.35
SDF4-206ENST00000478938 DEFB126Q9BYW3 111 aa17.26■□□□□ 0.35
SDF4-206ENST00000478938 RPP21Q9H633 154 aaKnown RBP17.26■□□□□ 0.35
SDF4-206ENST00000478938 SIVA1O15304 175 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 SP1P08047 785 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 C8orf88P0DMB2 117 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 ACP1P24666 158 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 ZNF329Q86UD4 541 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 BCL6BQ8N143 479 aaPredicted RBP17.25■□□□□ 0.35
SDF4-206ENST00000478938 CXCL13O43927 109 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 CELA2AP08217 269 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 FAM106CPP0CH98 169 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 FAM106AQ4KMX7 169 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 WDR86Q86TI4 376 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 SLC25A33Q9BSK2 321 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 PKIBQ9C010 78 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 JPT1Q9UK76 154 aa17.25■□□□□ 0.35
SDF4-206ENST00000478938 MYOD1P15172 320 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 GABRG2P18507 467 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 CACNG7P62955 275 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 HES3Q5TGS1 186 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 C8orf86Q6ZUL3 223 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 SLC25A2Q9BXI2 301 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 COL25A1Q9BXS0 654 aaPredicted RBP17.24■□□□□ 0.35
SDF4-206ENST00000478938 KNTC1P50748 2209 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 TMEM30CPA0ZSE6 113 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 DUSP23Q9BVJ7 150 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 HINT2Q9BX68 163 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 TMEM140Q9NV12 185 aa17.24■□□□□ 0.35
SDF4-206ENST00000478938 PTPRBP23467 1997 aa17.23■□□□□ 0.35
SDF4-206ENST00000478938 PROP1O75360 226 aa17.23■□□□□ 0.35
SDF4-206ENST00000478938 SPINK8P0C7L1 97 aa17.23■□□□□ 0.35
SDF4-206ENST00000478938 DSCR4P56555 118 aaPredicted RBP17.23■□□□□ 0.35
SDF4-206ENST00000478938 AMTNQ6UX39 209 aa17.23■□□□□ 0.35
SDF4-206ENST00000478938 FAM167A-AS1Q96KT0 104 aa17.23■□□□□ 0.35
SDF4-206ENST00000478938 OR11H12B2RN74 326 aa17.23■□□□□ 0.35
SDF4-206ENST00000478938 ERVK-16P61578 105 aa17.23■□□□□ 0.35
SDF4-206ENST00000478938 OR11H1Q8NG94 326 aa17.23■□□□□ 0.35
SDF4-206ENST00000478938 OR11H2Q8NH07 326 aa17.23■□□□□ 0.35
SDF4-206ENST00000478938 PHLDA1Q8WV24 401 aaPredicted RBP17.23■□□□□ 0.35
SDF4-206ENST00000478938 FSCN3Q9NQT6 498 aa17.23■□□□□ 0.35
SDF4-206ENST00000478938 CSN1S1P47710 185 aa17.22■□□□□ 0.35
SDF4-206ENST00000478938 GPR12P47775 334 aa17.22■□□□□ 0.35
SDF4-206ENST00000478938 LOXL1Q08397 574 aaPredicted RBP17.22■□□□□ 0.35
SDF4-206ENST00000478938 C19orf67A6NJJ6 358 aa17.22■□□□□ 0.35
SDF4-206ENST00000478938 MT-ATP8P03928 68 aa17.22■□□□□ 0.35
SDF4-206ENST00000478938 YRDCQ86U90 279 aaKnown RBP17.22■□□□□ 0.35
SDF4-206ENST00000478938 NHP2Q9NX24 153 aaKnown RBP17.22■□□□□ 0.35
SDF4-206ENST00000478938 FOXG1P55316 489 aaPredicted RBP17.21■□□□□ 0.35
SDF4-206ENST00000478938 OR9G1Q8NH87 305 aa17.21■□□□□ 0.35
SDF4-206ENST00000478938 PROK2Q9HC23 129 aa17.21■□□□□ 0.35
SDF4-206ENST00000478938 HEATR1Q9H583 2144 aaKnown RBP17.21■□□□□ 0.35
SDF4-206ENST00000478938 TANC2Q9HCD6 1990 aa17.21■□□□□ 0.35
SDF4-206ENST00000478938 INO80CQ6PI98 192 aaPredicted RBP17.21■□□□□ 0.35
SDF4-206ENST00000478938 TTTY13Q9BZ97 58 aa17.21■□□□□ 0.35
SDF4-206ENST00000478938 A0A096LNJ9 63 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 OOEPA6NGQ2 149 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 SLC25A17O43808 307 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 KIR2DL2P43627 348 aaPredicted RBP17.2■□□□□ 0.34
SDF4-206ENST00000478938 FXYD7P58549 80 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 MLANAQ16655 118 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 CEP290O15078 2479 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 VPS13AQ96RL7 3174 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 ADAMTS20P59510 1910 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 TRGV8A0A0C4DH27 118 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 FAM90A9PA6NNJ1 464 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 SS18L1O75177 396 aaPredicted RBP17.2■□□□□ 0.34
SDF4-206ENST00000478938 OR1C1Q15619 314 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 RBPMS2Q6ZRY4 209 aaKnown RBP17.2■□□□□ 0.34
SDF4-206ENST00000478938 DDB2Q92466 427 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 SIGLEC8Q9NYZ4 499 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 DYSFO75923 2080 aa17.2■□□□□ 0.34
SDF4-206ENST00000478938 PRUNE2Q8WUY3 3088 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 LTAP01374 205 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 P01737 135 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 IGHV3-13P01766 116 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 CT45A6P0DMU7 189 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 CT45A5P0DMU8 189 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 CT45A7P0DMV0 189 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 CT45A1Q5HYN5 189 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 PRSS3P2Q8NHM4 247 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 CT45A3Q8NHU0 189 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 CDIP1Q9H305 208 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 ERG28Q9UKR5 140 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 LINC00312Q9Y6C7 94 aa17.19■□□□□ 0.34
SDF4-206ENST00000478938 PPIFP30405 207 aaKnown RBP17.19■□□□□ 0.34
SDF4-206ENST00000478938 ERVK11-1P61568 191 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms