RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 MFAP2P55001 183 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 KRTDAPP60985 99 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 ERHP84090 104 aaKnown RBP8.7□□□□□ -1.02
VPS52-217ENST00000478934 TBR1Q16650 682 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 ASCL5Q7RTU5 278 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 FAM19A2Q8N3H0 131 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 OR4C13Q8NGP0 309 aa8.7□□□□□ -1.02
VPS52-217ENST00000478934 A6NNC1 897 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 C9JCJ5 164 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 DLL1O00548 723 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 TIGITQ495A1 244 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 IBA57Q5T440 356 aaKnown RBP8.69□□□□□ -1.02
VPS52-217ENST00000478934 C2orf88Q9BSF0 95 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 ZNF355PQ9NSJ1 428 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 C8orf88P0DMB2 117 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 IGHV1-8P0DP01 117 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 TPPP2P59282 170 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 BATFQ16520 125 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 C1orf194Q5T5A4 169 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 TPTE2P1Q5T6R2 138 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 TMEM167AQ8TBQ9 72 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 BLNKQ8WV28 456 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 FBXL7Q9UJT9 491 aa8.69□□□□□ -1.02
VPS52-217ENST00000478934 C22orf46C9J442 243 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 ORM2P19652 201 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 SELENOTP62341 195 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 CDSNQ15517 529 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 LEMD1Q68G75 181 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 CYB5R2Q6BCY4 276 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 DNAJC4Q9NNZ3 241 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 TMEM167BQ9NRX6 74 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 COL12A1Q99715 3063 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.68□□□□□ -1.02
VPS52-217ENST00000478934 FNDC10F2Z333 226 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 CORTO00230 105 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 USF1P22415 310 aaPredicted RBP8.68□□□□□ -1.02
VPS52-217ENST00000478934 COX7A1P24310 79 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 CD24P25063 80 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 SRIP30626 198 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 RANP62826 216 aaKnown RBP8.68□□□□□ -1.02
VPS52-217ENST00000478934 TMEM155Q4W5P6 130 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 SCNM1Q9BWG6 230 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 WASHC3Q9Y3C0 194 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 COL6A6A6NMZ7 2263 aa8.68□□□□□ -1.02
VPS52-217ENST00000478934 IGHV1-69-2A0A0G2JMI3 117 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 TCAPO15273 167 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 COX7A2P2O60397 106 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 TOX4O94842 621 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 GPR6P46095 362 aaPredicted RBP8.67□□□□□ -1.02
VPS52-217ENST00000478934 TMEM136Q6ZRR5 245 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 ATOH7Q8N100 152 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 IGF2BP2-AS1Q96M15 143 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 SSBP4Q9BWG4 385 aaPredicted RBP8.67□□□□□ -1.02
VPS52-217ENST00000478934 ZNF835Q9Y2P0 537 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 TBL2Q9Y4P3 447 aaKnown RBP8.67□□□□□ -1.02
VPS52-217ENST00000478934 SPTBN4Q9H254 2564 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 CHD8Q9HCK8 2581 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 FAM90A27PA6NNH2 459 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 ISLRO14498 428 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 ZNF253O75346 499 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 NTF3P20783 257 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 AMTP48728 403 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 COMPP49747 757 aaPredicted RBP8.67□□□□□ -1.02
VPS52-217ENST00000478934 NUTF2P61970 127 aaKnown RBP8.67□□□□□ -1.02
VPS52-217ENST00000478934 CX3CL1P78423 397 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 SLAQ13239 276 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 TMEM186Q96B77 213 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 KIR2DL5BA0A0G2JN68 375 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 KIR2DL5BA0A0G2JPC4 375 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 A0A1W2PN81 502 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 SIAH2O43255 324 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 FSTL3O95633 263 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 PPOXP50336 477 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 TAS2R45P59539 299 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 TNXAQ16473 311 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 C10orf113Q5VZT2 155 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 Q71RC1 249 aaPredicted RBP8.67□□□□□ -1.02
VPS52-217ENST00000478934 PDPNQ86YL7 162 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 KIR2DL5AQ8N109 375 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 BEND2Q8NDZ0 799 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 CDC42EP3Q9UKI2 254 aa8.67□□□□□ -1.02
VPS52-217ENST00000478934 CELSR1Q9NYQ6 3014 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 IGLC7A0M8Q6 106 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 BMPR1BO00238 502 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 CASP6P55212 293 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 ZNF841Q6ZN19 808 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 LINC00305Q7Z4B0 112 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 SIGLECL1Q8N7X8 197 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 OR1B1Q8NGR6 318 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 ASCL2Q99929 193 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 PAXXQ9BUH6 204 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 WNT10AQ9GZT5 417 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 TMEM133Q9H2Q1 129 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 AMMECR1Q9Y4X0 333 aaPredicted RBP8.66□□□□□ -1.02
VPS52-217ENST00000478934 TCRBV4S1A1TA0A5B7 111 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 NBL1P41271 181 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 CAMPP49913 170 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 TMEM30BQ3MIR4 351 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 LDLRAD2Q5SZI1 272 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 CACNG8Q8WXS5 425 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms