RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 DCUN1D4Q92564 292 aa15.26■□□□□ 0.03
ACTB-210ENST00000477812 SLC35E1Q96K37 410 aa15.26■□□□□ 0.03
ACTB-210ENST00000477812 GGACTQ9BVM4 153 aa15.26■□□□□ 0.03
ACTB-210ENST00000477812 NUPL2O15504 423 aaKnown RBP15.25■□□□□ 0.03
ACTB-210ENST00000477812 SCAF4O95104 1147 aaKnown RBP15.25■□□□□ 0.03
ACTB-210ENST00000477812 STX12Q86Y82 276 aa15.25■□□□□ 0.03
ACTB-210ENST00000477812 THAP8Q8NA92 274 aa15.25■□□□□ 0.03
ACTB-210ENST00000477812 ST6GAL2Q96JF0 529 aa15.25■□□□□ 0.03
ACTB-210ENST00000477812 CMYA5Q8N3K9 4069 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 OR10J1P30954 320 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 SYNJ2BPP57105 145 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 NHLH2Q02577 135 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 BAXQ07812 192 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 SLC38A11Q08AI6 406 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 VWC2Q2TAL6 325 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 C1QL4Q86Z23 238 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 TMEM217Q8N7C4 229 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 OR1S2Q8NGQ3 325 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 SLC25A31Q9H0C2 315 aa15.24■□□□□ 0.03
ACTB-210ENST00000477812 TRAV30A0A087WSZ9 112 aa15.23■□□□□ 0.03
ACTB-210ENST00000477812 IGHV3-35A0A0C4DH35 117 aa15.23■□□□□ 0.03
ACTB-210ENST00000477812 SMLR1H3BR10 107 aa15.23■□□□□ 0.03
ACTB-210ENST00000477812 TIGITQ495A1 244 aa15.23■□□□□ 0.03
ACTB-210ENST00000477812 UNQ9165/PRO28630Q6UXU0 137 aa15.23■□□□□ 0.03
ACTB-210ENST00000477812 REC114Q7Z4M0 266 aa15.23■□□□□ 0.03
ACTB-210ENST00000477812 MGAM2Q2M2H8 2515 aa15.22■□□□□ 0.03
ACTB-210ENST00000477812 NOTCH3Q9UM47 2321 aa15.22■□□□□ 0.03
ACTB-210ENST00000477812 LGALS9O00182 355 aa15.22■□□□□ 0.03
ACTB-210ENST00000477812 NDUFA4O00483 81 aa15.22■□□□□ 0.03
ACTB-210ENST00000477812 RPL12P30050 165 aaKnown RBP15.22■□□□□ 0.03
ACTB-210ENST00000477812 YPEL3P61236 119 aaPredicted RBP15.22■□□□□ 0.03
ACTB-210ENST00000477812 RELQ04864 619 aaPredicted RBP15.22■□□□□ 0.03
ACTB-210ENST00000477812 TMEM144Q7Z5S9 345 aa15.22■□□□□ 0.03
ACTB-210ENST00000477812 TMEM190Q8WZ59 177 aa15.22■□□□□ 0.03
ACTB-210ENST00000477812 LSM4Q9Y4Z0 139 aaKnown RBP15.22■□□□□ 0.03
ACTB-210ENST00000477812 HSPB11Q9Y547 144 aa15.22■□□□□ 0.03
ACTB-210ENST00000477812 A8MWP6 167 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 OVOL1O14753 267 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 S100A11P31949 105 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 HBG1P69891 147 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 HBG2P69892 147 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 AKR1C1Q04828 323 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 TREML4Q6UXN2 200 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 IL34Q6ZMJ4 242 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 ZNF600Q6ZNG1 722 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 OR9G4Q8NGQ1 327 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 RCC1LQ96I51 464 aaKnown RBP15.21■□□□□ 0.03
ACTB-210ENST00000477812 AQP10Q96PS8 301 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 TRGV9Q99603 122 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 ZFAND3Q9H8U3 227 aa15.21■□□□□ 0.03
ACTB-210ENST00000477812 RNF222A6NCQ9 220 aa15.2■□□□□ 0.02
ACTB-210ENST00000477812 TCTE3Q8IZS6 198 aa15.2■□□□□ 0.02
ACTB-210ENST00000477812 OR5C1Q8NGR4 320 aa15.2■□□□□ 0.02
ACTB-210ENST00000477812 TMEM147Q9BVK8 224 aa15.2■□□□□ 0.02
ACTB-210ENST00000477812 UQCC1Q9NVA1 299 aa15.2■□□□□ 0.02
ACTB-210ENST00000477812 TNFSF18Q9UNG2 199 aa15.2■□□□□ 0.02
ACTB-210ENST00000477812 FXYD6-FXYD2A0A087WZ82 144 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 TMEM213A2RRL7 107 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 SMCO3A2RU48 225 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 ZFP92A6NM28 416 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 SCGB2A1O75556 95 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 ZNF90Q03938 601 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 FAM106AQ4KMX7 169 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 TOMM20LQ6UXN7 152 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 OR11H4Q8NGC9 324 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 NPVFQ9HCQ7 196 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 WDR83OSQ9Y284 106 aa15.19■□□□□ 0.02
ACTB-210ENST00000477812 PUS1Q9Y606 427 aaKnown RBP eCLIP15.19■□□□□ 0.023e-13■□□□□ 8.3
ACTB-210ENST00000477812 TOMM40O96008 361 aa15.18■□□□□ 0.02
ACTB-210ENST00000477812 CD33P20138 364 aa15.18■□□□□ 0.02
ACTB-210ENST00000477812 ATP6V1FQ16864 119 aa15.18■□□□□ 0.02
ACTB-210ENST00000477812 ADAMTSL5Q6ZMM2 481 aa15.18■□□□□ 0.02
ACTB-210ENST00000477812 ZNF546Q86UE3 836 aa15.18■□□□□ 0.02
ACTB-210ENST00000477812 LILRB2Q8N423 598 aa15.18■□□□□ 0.02
ACTB-210ENST00000477812 IGHV3OR16-8A0A075B7F1 116 aa15.17■□□□□ 0.02
ACTB-210ENST00000477812 ZNF320A2RRD8 509 aa15.17■□□□□ 0.02
ACTB-210ENST00000477812 EDN2P20800 178 aa15.17■□□□□ 0.02
ACTB-210ENST00000477812 AKAP14Q86UN6 197 aa15.17■□□□□ 0.02
ACTB-210ENST00000477812 UBE2L5PA0A1B0GUS4 154 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 C2orf70A6NJV1 201 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 CSN3P07498 182 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 RD3LP0DJH9 198 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 PSG1P11464 419 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 ELLP55199 621 aaPredicted RBP15.16■□□□□ 0.02
ACTB-210ENST00000477812 CLINT1Q14677 625 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 TM4SF20Q53R12 229 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 TEPPQ6URK8 271 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 TMEM182Q6ZP80 229 aaPredicted RBP15.16■□□□□ 0.02
ACTB-210ENST00000477812 MGST2Q99735 147 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 WFDC1Q9HC57 220 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 DAZ1Q9NQZ3 744 aaKnown RBP15.16■□□□□ 0.02
ACTB-210ENST00000477812 PEMTQ9UBM1 199 aa15.16■□□□□ 0.02
ACTB-210ENST00000477812 SEC14L6B5MCN3 397 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 K7EMT4 169 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 YIF1AO95070 293 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 C8orf88P0DMB2 117 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 IGLL1P15814 213 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 CD300CQ08708 224 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 CYP2G1PQ6ZSU1 146 aa15.15■□□□□ 0.02
ACTB-210ENST00000477812 Q8WTZ3 238 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 722.5 ms