RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 MANBALQ9NQG1 85 aa9.45□□□□□ -0.9
PRPF39-203ENST00000477626 IGLV1-40P01703 118 aa9.45□□□□□ -0.9
PRPF39-203ENST00000477626 PRH1P02810 166 aa9.45□□□□□ -0.9
PRPF39-203ENST00000477626 LCN15Q6UWW0 184 aa9.45□□□□□ -0.9
PRPF39-203ENST00000477626 CLRN3Q8NCR9 226 aa9.45□□□□□ -0.9
PRPF39-203ENST00000477626 IER3P46695 156 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 Q8N2B8 174 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 ZNF502Q8TBZ5 544 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 WIPF2Q8TF74 440 aaPredicted RBP9.44□□□□□ -0.9
PRPF39-203ENST00000477626 CCDC140Q96MF4 163 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 NKX6-2Q9C056 277 aaPredicted RBP9.44□□□□□ -0.9
PRPF39-203ENST00000477626 KCNIP2Q9NS61 270 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 TRBV20OR9-2A0A075B6H5 130 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 RNF223E7ERA6 249 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 CLN5O75503 358 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 SUB1P53999 127 aaKnown RBP eCLIP9.44□□□□□ -0.9
PRPF39-203ENST00000477626 MYOZ3Q8TDC0 251 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 FOXC2Q99958 501 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 MRPL32Q9BYC8 188 aaKnown RBP9.44□□□□□ -0.9
PRPF39-203ENST00000477626 C7orf69Q9H7B7 122 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 MOB4Q9Y3A3 225 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 FASNP49327 2511 aaKnown RBP9.44□□□□□ -0.9
PRPF39-203ENST00000477626 SMCO3A2RU48 225 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 OR2C1O95371 312 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 ADMP35318 185 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 MEF2BQ02080 365 aaPredicted RBP9.44□□□□□ -0.9
PRPF39-203ENST00000477626 HNF4GQ14541 408 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 FAM122CQ6P4D5 195 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 SLC35E3Q7Z769 313 aa9.44□□□□□ -0.9
PRPF39-203ENST00000477626 GSX1Q9H4S2 264 aaPredicted RBP9.44□□□□□ -0.9
PRPF39-203ENST00000477626 HECTD1Q9ULT8 2610 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 TMEM250H0YL14 139 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 GCHFRP30047 84 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 RND2P52198 227 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 OR1L6Q8NGR2 347 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 ATP6V0BQ99437 205 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 MDFIC2A0A1B0GVS7 189 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 CLPSL1A2RUU4 121 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 CXorf1O96002 111 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 IGHV3-48P01763 117 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 APELAP0DMC3 54 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 YPEL3P61236 119 aaPredicted RBP9.43□□□□□ -0.9
PRPF39-203ENST00000477626 GNB1P62873 340 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 ETFRF1Q6IPR1 90 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 Q6YL49 198 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 TMEM68Q96MH6 324 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 HINT2Q9BX68 163 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 TUBA4BQ9H853 241 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 DNAH3Q8TD57 4116 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 CYB5BO43169 146 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 NDUFB8O95169 186 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 TOMM40O96008 361 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 CTSGP08311 255 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 C16orf82Q7Z2V1 217 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 SVBPQ8N300 66 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 VN1R17PQ8TDU5 208 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 PBDC1Q9BVG4 233 aa9.43□□□□□ -0.9
PRPF39-203ENST00000477626 ZNF491Q8N8L2 437 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 WFDC11Q8NEX6 87 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 IGHV3OR16-10A0A075B7F0 116 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 A0A087WWC5 75 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 GGTLC3B5MD39 225 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 PHOX2AO14813 284 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 MAPK1IP1LQ8NDC0 245 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 Q96MF0 132 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 TXN2Q99757 166 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 TMEM14CQ9P0S9 112 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 GNG13Q9P2W3 67 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 WNK2Q9Y3S1 2297 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 COLCA2A8K830 154 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 HMGB3O15347 200 aaKnown RBP9.42□□□□□ -0.9
PRPF39-203ENST00000477626 BRS3P32247 399 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 TAGLN2P37802 199 aaKnown RBP9.42□□□□□ -0.9
PRPF39-203ENST00000477626 SELENOTP62341 195 aa9.42□□□□□ -0.9
PRPF39-203ENST00000477626 TRAV5A0A0B4J249 113 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 F8W036 122 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 ATP5G3P48201 142 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 RNF152Q8N8N0 203 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 RXFP4Q8TDU9 374 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 C2CD4CQ8TF44 421 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 IGF2BP2-AS1Q96M15 143 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 SSX3Q99909 188 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 SDF2L1Q9HCN8 221 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 IGLC2P0DOY2 106 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 RHOBP62745 196 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 TREM1Q9NP99 234 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 TNFRSF19Q9NS68 423 aa9.41□□□□□ -0.9
PRPF39-203ENST00000477626 A0A1B0GV50 99 aa9.4□□□□□ -0.9
PRPF39-203ENST00000477626 H3BRN7 92 aa9.4□□□□□ -0.9
PRPF39-203ENST00000477626 APOC3P02656 99 aa9.4□□□□□ -0.9
PRPF39-203ENST00000477626 PSG1P11464 419 aa9.4□□□□□ -0.9
PRPF39-203ENST00000477626 PPT1P50897 306 aa9.4□□□□□ -0.9
PRPF39-203ENST00000477626 DEFB112Q30KQ8 113 aa9.4□□□□□ -0.9
PRPF39-203ENST00000477626 TMEM219Q86XT9 240 aa9.4□□□□□ -0.9
PRPF39-203ENST00000477626 MRPL41Q8IXM3 137 aaKnown RBP9.4□□□□□ -0.9
PRPF39-203ENST00000477626 IGLV2-8P01709 118 aa9.4□□□□□ -0.9
PRPF39-203ENST00000477626 MISP3Q96FF7 219 aa9.4□□□□□ -0.9
PRPF39-203ENST00000477626 DNAJC4Q9NNZ3 241 aa9.4□□□□□ -0.9
PRPF39-203ENST00000477626 U3KQE9 123 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms