RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ACP7Q6ZNF0 438 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 PRSS33Q8NF86 280 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 ERRFI1Q9UJM3 462 aaPredicted RBP10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 FREM2Q5SZK8 3169 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 IGKV3D-15A0A087WSY6 115 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 PRSS29PA6NIE9 313 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 FAM90A27PA6NNH2 459 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 SCGB2A1O75556 95 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 NXPH3O95157 252 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 CCL1P22362 96 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 RPL8P62917 257 aaKnown RBP10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 ZNF766Q5HY98 468 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 CNOT1A5YKK6 2376 aaKnown RBP10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 E9PLN8 166 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 TMEM262E9PQX1 116 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 MRPL33O75394 65 aaKnown RBP10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 EVI2AP22794 236 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 NBL1P41271 181 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 PCBD1P61457 104 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 SRYQ05066 204 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 FOXE3Q13461 319 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 ATP1A1-AS1Q5TC04 95 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 TMEM14EPQ6UXP3 125 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 NANOS1Q8WY41 292 aaKnown RBP10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 PRRG4Q9BZD6 226 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 SHANK1Q9Y566 2161 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 H3BMG7 143 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 MGST1P10620 155 aaKnown RBP10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 PRR30Q53SZ7 412 aaPredicted RBP10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 Q6Q795 121 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 URB1-AS1Q96HZ7 61 aa10.38□□□□□ -0.75
RTFDC1-207ENST00000477573 M0R135 149 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 SPINK4O60575 86 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 IGHG3P01860 377 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 OPRK1P41145 380 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 RPL31P62899 125 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 GUSBP1Q15486 140 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 C1QL2Q7Z5L3 287 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 MOGAT3Q86VF5 341 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 STPG3Q8N7X2 389 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 PHLDA1Q8WV24 401 aaPredicted RBP10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 ZNF799Q96GE5 643 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 PRELID3AQ96N28 172 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 FOXB1Q99853 325 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 SIGLEC9Q9Y336 463 aa10.37□□□□□ -0.75
RTFDC1-207ENST00000477573 ZNF816-ZNF321PA0A0X1KG74 233 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 TEX50A0A1B0GTY4 177 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 F8WDY8 70 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 ZNF837Q96EG3 531 aaPredicted RBP10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 NPCDR1Q9BY65 106 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 MPC1Q9Y5U8 109 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 SOX21Q9Y651 276 aaPredicted RBP10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 ZNF292O60281 2723 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 IGKV1-9A0A0C4DH69 117 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 A0A1B0GWB2 263 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 LY6DQ14210 128 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 DIAPH2-AS1Q14236 149 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 PRR31Q5SQ13 230 aa10.36□□□□□ -0.75
RTFDC1-207ENST00000477573 IAPPP10997 89 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 IFITM1P13164 125 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 B4GALT1P15291 398 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 FOXG1P55316 489 aaPredicted RBP10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 SLC35B1P78383 322 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 PSG5Q15238 335 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 CRIP3Q6Q6R5 217 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 C1QTNF5Q9BXJ0 243 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 RAB9BQ9NP90 201 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 HIGD1BQ9P298 99 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 DUSP13Q9UII6 198 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 RIF1Q5UIP0 2472 aaKnown RBP10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 DHRS3O75911 302 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 IGLV3-1P01715 115 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 AREGP15514 252 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 CCL11P51671 97 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 MFAP4P55083 255 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 VWC2Q2TAL6 325 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 ZNF718Q3SXZ3 478 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 PSMG4Q5JS54 123 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 SPANXN5Q5MJ07 72 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 LINC00173Q6ZV60 143 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 SSX8Q7RTT4 187 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 DNAJC13O75165 2243 aa10.35□□□□□ -0.75
RTFDC1-207ENST00000477573 PTPRBP23467 1997 aa10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 TRGV5A0A0B4J1U4 118 aa10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 SYNGR3O43761 229 aa10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 SLC25A5P05141 298 aaKnown RBP10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 RTL8BQ17RB0 113 aa10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 TTC32Q5I0X7 151 aa10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 TMEM211Q6ICI0 200 aa10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 ZNF818PQ6ZRF7 136 aa10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 ATP5L2Q7Z4Y8 100 aa10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 MRPL32Q9BYC8 188 aaKnown RBP10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 ZNF407Q9C0G0 2248 aa10.34□□□□□ -0.75
RTFDC1-207ENST00000477573 A0A0G2JRQ6 117 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 MOSP00540 346 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 ZNF32P17041 273 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 CRYGSP22914 178 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 GAGE2BQ13066 116 aa10.33□□□□□ -0.76
RTFDC1-207ENST00000477573 FHL3Q13643 280 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms