RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SULT1A1P50225 295 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 PAX9P55771 341 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 ATP5IP56385 69 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-221ENST00000477561 HBG1P69891 147 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 HBG2P69892 147 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 PRCDQ00LT1 54 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 CLEC19AQ6UXS0 136 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 IL34Q6ZMJ4 242 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 ZNF767PQ75MW2 155 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 OR1L8Q8NGR8 309 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 ZNF471Q9BX82 626 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-221ENST00000477561 PLEKHA3Q9HB20 300 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 STRAPQ9Y3F4 350 aaKnown RBP6.31□□□□□ -1.4
HDAC6-221ENST00000477561 DMRT1Q9Y5R6 373 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 U3KQ87 197 aa6.31□□□□□ -1.4
HDAC6-221ENST00000477561 COL7A1Q02388 2944 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 IGLV11-55A0A075B6I3 123 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 IGHV3-21A0A0B4J1V1 117 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 IGSF23A1L1A6 192 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 MFSD2BA6NFX1 497 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 TMEM50AO95807 157 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 IGLV1-51P01701 117 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 CSN3P07498 182 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 OR13C7P0DN81 318 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 EDN2P20800 178 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 RAB11AP62491 216 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 ERHP84090 104 aaKnown RBP6.3□□□□□ -1.4
HDAC6-221ENST00000477561 ZNF266Q14584 549 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 SPANXN5Q5MJ07 72 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 EIF5AL1Q6IS14 154 aaKnown RBP6.3□□□□□ -1.4
HDAC6-221ENST00000477561 SLC25A24Q6NUK1 477 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 OR1S2Q8NGQ3 325 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 STOML3Q8TAV4 291 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 PHYHIPLQ96FC7 376 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 CCDC140Q96MF4 163 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 HEYLQ9NQ87 328 aaPredicted RBP6.3□□□□□ -1.4
HDAC6-221ENST00000477561 NDUFA4L2Q9NRX3 87 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 FBXL17Q9UF56 701 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 SELENOKQ9Y6D0 94 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 SMAD5-AS1Q9Y6J3 95 aa6.3□□□□□ -1.4
HDAC6-221ENST00000477561 HUWE1Q7Z6Z7 4374 aaKnown RBP6.3□□□□□ -1.4
HDAC6-221ENST00000477561 IZUMO1RA6ND01 250 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 INS-IGF2F8WCM5 200 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 H3BP45 60 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 GGCTO75223 188 aaKnown RBP6.29□□□□□ -1.4
HDAC6-221ENST00000477561 IFNA10P01566 189 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 IFNA5P01569 189 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 CLEC3BP05452 202 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 HIST1H1BP16401 226 aaKnown RBP6.29□□□□□ -1.4
HDAC6-221ENST00000477561 ARL3P36405 182 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 IFITM2Q01629 132 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 WT1-ASQ06250 92 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 ATP6V1FQ16864 119 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 SPINK9Q5DT21 86 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 TEX261Q6UWH6 196 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 TMEM14EPQ6UXP3 125 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 ADAMTSL5Q6ZMM2 481 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 HSD17B13Q7Z5P4 300 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-221ENST00000477561 BAP18Q8IXM2 172 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 UBAC2Q8NBM4 344 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 SLC24A4Q8NFF2 622 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 OR10P1Q8NGE3 313 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 OR5C1Q8NGR4 320 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 ST8SIA2Q92186 375 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 EEF1AKMT3Q96AZ1 226 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 PINX1Q96BK5 328 aaKnown RBP6.29□□□□□ -1.4
HDAC6-221ENST00000477561 ATP5SQ99766 215 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 SMIM3Q9BZL3 60 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 PEMTQ9UBM1 199 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 UBQLN2Q9UHD9 624 aa6.29□□□□□ -1.4
HDAC6-221ENST00000477561 PAIP2BQ9ULR5 123 aaKnown RBP6.29□□□□□ -1.4
HDAC6-221ENST00000477561 IGHV3-35A0A0C4DH35 117 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 ZNF320A2RRD8 509 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 CST7O76096 145 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 METTL15P1P0C7V9 234 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 NPY1RP25929 384 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 GPR183P32249 361 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 SNCAP37840 140 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 HTR2BP41595 481 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 SUB1P53999 127 aaKnown RBP eCLIP6.28□□□□□ -1.4
HDAC6-221ENST00000477561 MFAP2P55001 183 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 RAB14P61106 215 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 NHLH2Q02577 135 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 KLK9Q2XQG4 91 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 Q8N1Y9 231 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 LILRB2Q8N423 598 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 TMEM217Q8N7C4 229 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 ZNF680Q8NEM1 530 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 SCARB1Q8WTV0 552 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 CACNG8Q8WXS5 425 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 SRSF8Q9BRL6 282 aaKnown RBP6.28□□□□□ -1.4
HDAC6-221ENST00000477561 CYTL1Q9NRR1 136 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 KLK9Q9UKQ9 250 aa6.28□□□□□ -1.4
HDAC6-221ENST00000477561 TRBV7-1A0A0A6YYK4 115 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 C2orf70A6NJV1 201 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 C15orf62A8K5M9 175 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 IFNA4P05014 189 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 FRMD6-AS1P0C7T7 363 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 FOLR2P14207 255 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 SMCPP49901 116 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms