RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 BPIFB3P59826 476 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 SELENOTP62341 195 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 UBE2L3P68036 154 aaKnown RBP8.81□□□□□ -1
HLA-DMB-260ENST00000477537 LCE2DQ5TA82 110 aaPredicted RBP8.81□□□□□ -1
HLA-DMB-260ENST00000477537 OR11H6Q8NGC7 330 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 OR10G8Q8NGN5 311 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 OR1P1Q8NH06 330 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 IGFBPL1Q8WX77 278 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 RNF5Q99942 180 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 TNFRSF19Q9NS68 423 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 ZNF355PQ9NSJ1 428 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 DPM3Q9P2X0 92 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 HILPDAQ9Y5L2 63 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 DCHS2Q6V1P9 2916 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 A0A1W2PRD5 423 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 A0A1W2PRE2 83 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 A0A1W2PRF3 423 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 A0A1W2PRM7 423 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 HELTA6NFD8 242 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 GGTLC3B5MD39 225 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 K7EN84 100 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 SUMO1P63165 101 aaKnown RBP8.8□□□□□ -1
HLA-DMB-260ENST00000477537 GFI1BQ5VTD9 330 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 TEX38Q6PEX7 206 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 SRSF12Q8WXF0 261 aaKnown RBP8.8□□□□□ -1
HLA-DMB-260ENST00000477537 C22orf15Q8WYQ4 148 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 IMMP2LQ96T52 175 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 UBTD1Q9HAC8 227 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 F11RQ9Y624 299 aaKnown RBP8.8□□□□□ -1
HLA-DMB-260ENST00000477537 LY96Q9Y6Y9 160 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 DOPEY1Q5JWR5 2465 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 ELOA3CA0A087WX78 387 aaPredicted RBP8.8□□□□□ -1
HLA-DMB-260ENST00000477537 A0A0U1RQK1 487 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 TYMSP04818 313 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 PYYP10082 97 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 PRTN3P24158 256 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 GPR6P46095 362 aaPredicted RBP8.8□□□□□ -1
HLA-DMB-260ENST00000477537 GNG4P50150 75 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 MMDQ15546 238 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 PDZD11Q5EBL8 140 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 LHFPL4Q7Z7J7 247 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 SGMS2Q8NHU3 365 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 ITLN2Q8WWU7 325 aaPredicted RBP8.8□□□□□ -1
HLA-DMB-260ENST00000477537 EAF1Q96JC9 268 aaPredicted RBP8.8□□□□□ -1
HLA-DMB-260ENST00000477537 TRGV9Q99603 122 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 PAXXQ9BUH6 204 aa8.8□□□□□ -1
HLA-DMB-260ENST00000477537 GCN1Q92616 2671 aaKnown RBP8.79□□□□□ -1
HLA-DMB-260ENST00000477537 ZNF320A2RRD8 509 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 ODF3BA8MYP8 253 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 CORTO00230 105 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 NDUFS7O75251 213 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 CNIH1O95406 144 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 ORM2P19652 201 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 S100A2P29034 98 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 CEACAM3P40198 252 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 LCN2P80188 198 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 FOXL1Q12952 345 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 CENPWQ5EE01 88 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 HIST3H2BBQ8N257 126 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 OR1B1Q8NGR6 318 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 CFHR4Q92496 578 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 GPR61Q9BZJ8 451 aa8.79□□□□□ -1
HLA-DMB-260ENST00000477537 RNF224P0DH78 156 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 CD24P25063 80 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 OR5I1Q13606 314 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 ACTL10Q5JWF8 245 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 LINC00305Q7Z4B0 112 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 TMEM116Q8NCL8 245 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 OR51M1Q9H341 326 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 GAR1Q9NY12 217 aaKnown RBP8.78□□□□□ -1
HLA-DMB-260ENST00000477537 DMRT1Q9Y5R6 373 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 CENPEQ02224 2701 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 SLC17A3O00476 420 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 NBR2O15453 112 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 PAX2Q02962 417 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 VMO1Q7Z5L0 202 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 PERPQ96FX8 193 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 BTF3L4Q96K17 158 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 GSX1Q9H4S2 264 aaPredicted RBP8.78□□□□□ -1
HLA-DMB-260ENST00000477537 NIT2Q9NQR4 276 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 PITPNC1Q9UKF7 332 aa8.78□□□□□ -1
HLA-DMB-260ENST00000477537 ZFP36P26651 326 aaKnown RBP8.77□□□□□ -1.01
HLA-DMB-260ENST00000477537 ERVFC1-1P60608 527 aa8.77□□□□□ -1.01
HLA-DMB-260ENST00000477537 HES1Q14469 280 aa8.77□□□□□ -1.01
HLA-DMB-260ENST00000477537 TIGITQ495A1 244 aa8.77□□□□□ -1.01
HLA-DMB-260ENST00000477537 OR10D4PQ8NGN7 298 aa8.77□□□□□ -1.01
HLA-DMB-260ENST00000477537 FXYD5Q96DB9 178 aa8.77□□□□□ -1.01
HLA-DMB-260ENST00000477537 SRSF8Q9BRL6 282 aaKnown RBP8.77□□□□□ -1.01
HLA-DMB-260ENST00000477537 WNT10AQ9GZT5 417 aa8.77□□□□□ -1.01
HLA-DMB-260ENST00000477537 IL36BQ9NZH7 164 aa8.77□□□□□ -1.01
HLA-DMB-260ENST00000477537 FASNP49327 2511 aaKnown RBP8.77□□□□□ -1.01
HLA-DMB-260ENST00000477537 A6NNC1 897 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 C19orf84I3L1E1 186 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 HYPMO75409 117 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 SNRPCP09234 159 aaKnown RBP8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 RPL15P61313 204 aaKnown RBP8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 SSX2Q16385 188 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 FBLN7Q53RD9 439 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 ZNF329Q86UD4 541 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 NPBQ8NG41 125 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms