RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CD69Q07108 199 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 RAB32Q13637 225 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 CD300EQ496F6 205 aaPredicted RBP9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 SPINK9Q5DT21 86 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 UNQ9165/PRO28630Q6UXU0 137 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 ZNF600Q6ZNG1 722 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 CACNG8Q8WXS5 425 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 PINX1Q96BK5 328 aaKnown RBP9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 GINS3Q9BRX5 216 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 ZNF785A8K8V0 405 aa9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 TSC22D2O75157 780 aa9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 NXPH3O95157 252 aa9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 TMEM50AO95807 157 aa9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 PAX9P55771 341 aa9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 RAP2BP61225 183 aa9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 LAMTOR1Q6IAA8 161 aa9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 UBAC2Q8NBM4 344 aa9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 FAM110AQ9BQ89 295 aa9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 MAGT1Q9H0U3 335 aa9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 FNDC4Q9H6D8 234 aaPredicted RBP9.33□□□□□ -0.92
CLCNKA-205ENST00000477360 TSPAN4O14817 238 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 DEDDO75618 318 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 SCAF4O95104 1147 aaKnown RBP9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 SCGB1D2O95969 90 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 IFNA10P01566 189 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 RLN2P04090 185 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 PET100P0DJ07 73 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 LYL1P12980 280 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 PVALBP20472 110 aaPredicted RBP9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 YPEL3P61236 119 aaPredicted RBP9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 RAB11AP62491 216 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 TM4SF20Q53R12 229 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 PRSS54Q6PEW0 395 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 OR1S2Q8NGQ3 325 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 TMEM170AQ8WVE7 144 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 PPP1R1CQ8WVI7 109 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 ZNF414Q96IQ9 312 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 SPAG8Q99932 426 aaPredicted RBP9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 SMPXQ9UHP9 88 aa9.32□□□□□ -0.92
CLCNKA-205ENST00000477360 TRAV14DV4A0A0A6YYC5 116 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 IGHV3-21A0A0B4J1V1 117 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 SSSCA1O60232 199 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 MPC2O95563 127 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 IAPPP10997 89 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 FGL1Q08830 312 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 TMEM14EPQ6UXP3 125 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 RBPMS2Q6ZRY4 209 aaKnown RBP9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 SLC16A13Q7RTY0 426 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 TMEM61Q8N0U2 210 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 WDR89Q96FK6 387 aaPredicted RBP9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 TMEM231Q9H6L2 316 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 PSENENQ9NZ42 101 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 MLXQ9UH92 298 aa9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 STRAPQ9Y3F4 350 aaKnown RBP9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 LSM5Q9Y4Y9 91 aaKnown RBP9.31□□□□□ -0.92
CLCNKA-205ENST00000477360 IGHV7-4-1A0A0J9YVY3 117 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 A0A1W2PS18 150 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 IZUMO1RA6ND01 250 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 PRSS46E5RG02 174 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 E5RGE8 158 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 H0YIZ8 118 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 L7N2F9 121 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 IGKV1-17P01599 117 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 IGLC1P0CG04 106 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 CMC4P56277 68 aaPredicted RBP9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 VAMP2P63027 116 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 C11orf87Q6NUJ2 197 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 TOMM20LQ6UXN7 152 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 HAPLN4Q86UW8 402 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 C20orf24Q9BUV8 137 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 RNF126Q9BV68 326 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 ZFAND3Q9H8U3 227 aa9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 LYRM2Q9NU23 88 aaPredicted RBP9.3□□□□□ -0.92
CLCNKA-205ENST00000477360 TRAV2A0A0B4J234 112 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 IGHV3-35A0A0C4DH35 117 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 OR4C46A6NHA9 309 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 PMS2P5A8MQ11 134 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 YIF1AO95070 293 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 IFNA4P05014 189 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 FABP1P07148 127 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 FRMD6-AS1P0C7T7 363 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 IGHV4-30-4P0DP06 118 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 P2RY1P47900 373 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 BCAP31P51572 246 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 S100A10P60903 97 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 SPANXN5Q5MJ07 72 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 BTNL8Q6UX41 500 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 Q8WTZ3 238 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 NEURL2Q9BR09 285 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 VSIRQ9H7M9 311 aa9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 PUS1Q9Y606 427 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLCNKA-205ENST00000477360 FNDC10F2Z333 226 aa9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 CHEK1O14757 476 aa9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 CFDP00746 253 aaPredicted RBP9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 CRYBB3P26998 211 aa9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 OR10J1P30954 320 aa9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 NUP62P37198 522 aaPredicted RBP9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 RND2P52198 227 aa9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 GUCA2BQ16661 112 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms