RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RAB9BQ9NP90 201 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 A6NDN8 102 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 WNT9BO14905 357 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 C2orf83Q53S99 150 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 LINC01545Q5VT33 79 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 RFESDQ8TAC1 157 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 FAM167A-AS1Q96KT0 104 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 SSBP4Q9BWG4 385 aaPredicted RBP12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 A8MWL6 223 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 AHRRA9YTQ3 701 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 H3BRM9 83 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 CAMPP49913 170 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 PRCDQ00LT1 54 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 CR1LQ2VPA4 569 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 VHLLQ6RSH7 139 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 ZNF329Q86UD4 541 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 SLC25A2Q9BXI2 301 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 GFRA4Q9GZZ7 299 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 IFI27L2Q9H2X8 130 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 RPH3ALQ9UNE2 315 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 DNAJC13O75165 2243 aa12.41□□□□□ -0.42
CLSTN1-205ENST00000477264 F2RL2O00254 374 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 HTR1DP28221 377 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 C11orf53Q8IXP5 236 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 OR1L8Q8NGR8 309 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 PPP1R35Q8TAP8 253 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 NDFIP1Q9BT67 221 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 FAM234AQ9H0X4 552 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 RPP21Q9H633 154 aaKnown RBP12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 OBP2BQ9NPH6 170 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 ZNF492Q9P255 531 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 OR51B2Q9Y5P1 312 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 FAM231BA6NCW3 169 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 C9orf118A6NHY6 69 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 SMIM17P0DL12 118 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 OR5A1Q8NGJ0 315 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 OR1L4Q8NGR5 311 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 OR1B1Q8NGR6 318 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 DKK4Q9UBT3 224 aa12.4□□□□□ -0.42
CLSTN1-205ENST00000477264 PSMB11A5LHX3 300 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 K7EP34 96 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 RPL39P5Q59GN2 51 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 TMEM97Q5BJF2 176 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 WDR82Q6UXN9 313 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 CACNG8Q8WXS5 425 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 ZNF430Q9H8G1 570 aaPredicted RBP12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 TP73-AS1Q9UF72 201 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 FRYQ5TBA9 3013 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 A0A087X0K7 114 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 SCGB1A1P11684 91 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 C2orf91Q6ZV80 131 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 SVIPQ8NHG7 77 aa12.39□□□□□ -0.43
CLSTN1-205ENST00000477264 ACACAQ13085 2346 aa12.38□□□□□ -0.43
CLSTN1-205ENST00000477264 LAMA5O15230 3695 aa12.38□□□□□ -0.43
CLSTN1-205ENST00000477264 IGKV1OR2-108A0A075B7D4 117 aa12.38□□□□□ -0.43
CLSTN1-205ENST00000477264 SH2D7A6NKC9 451 aaPredicted RBP12.38□□□□□ -0.43
CLSTN1-205ENST00000477264 C3AR1Q16581 482 aa12.38□□□□□ -0.43
CLSTN1-205ENST00000477264 CLEC2AQ6UVW9 174 aa12.38□□□□□ -0.43
CLSTN1-205ENST00000477264 TPRX1Q8N7U7 411 aa12.38□□□□□ -0.43
CLSTN1-205ENST00000477264 PAXXQ9BUH6 204 aa12.38□□□□□ -0.43
CLSTN1-205ENST00000477264 SPRR3Q9UBC9 169 aa12.38□□□□□ -0.43
CLSTN1-205ENST00000477264 APC2O95996 2303 aa12.38□□□□□ -0.43
CLSTN1-205ENST00000477264 K7ENP7 123 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 IGHG3P01860 377 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 CD69Q07108 199 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 MZT1Q08AG7 82 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 LTC4SQ16873 150 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 ALKBH6Q3KRA9 238 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 INO80CQ6PI98 192 aaPredicted RBP12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 ZNF826PQ6ZT77 177 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 LINC00173Q6ZV60 143 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 NEGR1Q7Z3B1 354 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 CEP295Q9C0D2 2601 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 LOC102724200A0A096LPH7 203 aaPredicted RBP12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 MGST3O14880 152 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 SAP30O75446 220 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 RIPPLY3P57055 190 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 LOXL3P58215 753 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 RBPJQ06330 500 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 RBPMS2Q6ZRY4 209 aaKnown RBP12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 Q6ZS92 163 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 OR1N2Q8NGR9 330 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 SARAFQ96BY9 339 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 METRNQ9UJH8 293 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 KLF12Q9Y4X4 402 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 SPTBN4Q9H254 2564 aa12.37□□□□□ -0.43
CLSTN1-205ENST00000477264 CACNA1DQ01668 2161 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 COX7A2P2O60397 106 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 S100A7P31151 101 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 EDDM3AQ14507 147 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 GCSAMQ8N6F7 178 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 PRSS22Q9GZN4 317 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 URB1O60287 2271 aaKnown RBP12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 APOA2P02652 100 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 UCNP55089 124 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 LHFPL4Q7Z7J7 247 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 STXBP6Q8NFX7 210 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 KLF14Q8TD94 323 aaPredicted RBP12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 TNFRSF14Q92956 283 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms