RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 CMC4P56277 68 aaPredicted RBP8.5□□□□□ -1.05
VARS2-208ENST00000477052 AP3S2P59780 193 aa8.5□□□□□ -1.05
VARS2-208ENST00000477052 TMEM187Q14656 261 aa8.5□□□□□ -1.05
VARS2-208ENST00000477052 OR4C16Q8NGL9 310 aa8.5□□□□□ -1.05
VARS2-208ENST00000477052 OR13C8Q8NGS7 320 aa8.5□□□□□ -1.05
VARS2-208ENST00000477052 TERB2Q8NHR7 220 aa8.5□□□□□ -1.05
VARS2-208ENST00000477052 MARCH1Q8TCQ1 289 aa8.5□□□□□ -1.05
VARS2-208ENST00000477052 DEDD2Q8WXF8 326 aa8.5□□□□□ -1.05
VARS2-208ENST00000477052 CLEC5AQ9NY25 188 aa8.5□□□□□ -1.05
VARS2-208ENST00000477052 RBMY1A1P0DJD3 496 aaKnown RBP8.49□□□□□ -1.05
VARS2-208ENST00000477052 RBMY1CP0DJD4 496 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 C4BPBP20851 252 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 NPPCP23582 126 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 FAUP35544 74 aaKnown RBP8.49□□□□□ -1.05
VARS2-208ENST00000477052 KLF9Q13886 244 aaPredicted RBP8.49□□□□□ -1.05
VARS2-208ENST00000477052 OXA1LQ15070 435 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 RBMY1FQ15415 496 aaKnown RBP8.49□□□□□ -1.05
VARS2-208ENST00000477052 PVRIGQ6DKI7 326 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 STHQ8IWL8 128 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 TOMM5Q8N4H5 51 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 RNASE11Q8TAA1 199 aaKnown RBP8.49□□□□□ -1.05
VARS2-208ENST00000477052 LHFPL5Q8TAF8 219 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 TMEM230Q96A57 120 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 ZNF486Q96H40 463 aaPredicted RBP8.49□□□□□ -1.05
VARS2-208ENST00000477052 SDHCQ99643 169 aaPredicted RBP8.49□□□□□ -1.05
VARS2-208ENST00000477052 PRRT1Q99946 306 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 PDCD10Q9BUL8 212 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 PRR13Q9NZ81 148 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 COPZ2Q9P299 210 aa8.49□□□□□ -1.05
VARS2-208ENST00000477052 IGHV4-28A0A0C4DH34 117 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 IGLL5B9A064 214 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 K7EQG2 157 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 CLN5O75503 358 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 IGKV1-17P01599 117 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 IFNA4P05014 189 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 OR5AC1P0C628 307 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 P2RY1P47900 373 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 DEFA1P59665 94 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 DEFA3P59666 94 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 SURF2Q15527 256 aaPredicted RBP8.48□□□□□ -1.05
VARS2-208ENST00000477052 LGALS9CQ6DKI2 356 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 GSG1LQ6UXU4 331 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 Q8NAQ8 132 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 ZFAND1Q8TCF1 268 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 RRNAD1Q96FB5 475 aaKnown RBP8.48□□□□□ -1.05
VARS2-208ENST00000477052 METTL26Q96S19 204 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 C11orf68Q9H3H3 251 aaKnown RBP8.48□□□□□ -1.05
VARS2-208ENST00000477052 ENY2Q9NPA8 101 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 SCP2D1Q9UJQ7 156 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 VPS13DQ5THJ4 4388 aa8.48□□□□□ -1.05
VARS2-208ENST00000477052 UCP1P25874 307 aa8.47□□□□□ -1.05
VARS2-208ENST00000477052 CRYBB3P26998 211 aa8.47□□□□□ -1.05
VARS2-208ENST00000477052 SUB1P53999 127 aaKnown RBP eCLIP8.47□□□□□ -1.05
VARS2-208ENST00000477052 BAK1Q16611 211 aa8.47□□□□□ -1.05
VARS2-208ENST00000477052 ACTL10Q5JWF8 245 aa8.47□□□□□ -1.05
VARS2-208ENST00000477052 TRIQKQ629K1 86 aa8.47□□□□□ -1.05
VARS2-208ENST00000477052 ZNF767PQ75MW2 155 aa8.47□□□□□ -1.05
VARS2-208ENST00000477052 TRPT1Q86TN4 253 aaKnown RBP8.47□□□□□ -1.05
VARS2-208ENST00000477052 OR51S1Q8NGJ8 323 aa8.47□□□□□ -1.05
VARS2-208ENST00000477052 OR4X1Q8NH49 305 aa8.47□□□□□ -1.05
VARS2-208ENST00000477052 C2CD4CQ8TF44 421 aa8.47□□□□□ -1.05
VARS2-208ENST00000477052 RTBDNQ9BSG5 229 aaPredicted RBP8.47□□□□□ -1.05
VARS2-208ENST00000477052 MFFQ9GZY8 342 aa8.47□□□□□ -1.05
VARS2-208ENST00000477052 INS-IGF2F8WCM5 200 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 IL7P13232 177 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 INPP1P49441 399 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 RND2P52198 227 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 BSXQ3C1V8 233 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 AKAP14Q86UN6 197 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 SELENOHQ8IZQ5 122 aaKnown RBP8.46□□□□□ -1.06
VARS2-208ENST00000477052 CCDC71LQ8N9Z2 235 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 DCANP1Q8TF63 244 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 GLYATL2Q8WU03 294 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 TMEM170AQ8WVE7 144 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 GPR146Q96CH1 333 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 TMEM231Q9H6L2 316 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 HEYLQ9NQ87 328 aaPredicted RBP8.46□□□□□ -1.06
VARS2-208ENST00000477052 MCUBQ9NWR8 336 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 CACNG5Q9UF02 275 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 GPR132Q9UNW8 380 aa8.46□□□□□ -1.06
VARS2-208ENST00000477052 HERC2O95714 4834 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 ELOA3CA0A087WX78 387 aaPredicted RBP8.45□□□□□ -1.06
VARS2-208ENST00000477052 TRAV2A0A0B4J234 112 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 TEX13DA0A0J9YY54 714 aaPredicted RBP8.45□□□□□ -1.06
VARS2-208ENST00000477052 CORTO00230 105 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 ATG12O94817 140 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 CD5P06127 495 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 IGLC1P0CG04 106 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 HLA-DMBP28068 263 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 DEFB1P60022 68 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 SPCS3P61009 180 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 DHODHQ02127 395 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 DHRS2Q13268 280 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 PSMG4Q5JS54 123 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 TMEM268Q5VZI3 342 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 PRSS54Q6PEW0 395 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 Q6ZTC4 211 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 SCGB3A2Q96PL1 93 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 CCDC32Q9BV29 185 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 SCRT1Q9BWW7 348 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms